Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0482 ATGTATAACCTCAACACAAGATCAGCTCTTTCCCTCGCTCTCTTGCTCCTTCTCTCTTTATTCTCTGTGCTTCACTTTTTTCAGTTCCACAATGCCAGCCTCTCAAAAACACACCTCCATTTACAAACACACCTGCAAGTAGCCCAATCCACATGCCAAGGAACACTCTACCCAAAACTCTGCGTTTCAACACTTTCTTCCCTTCCTGATCTTCCCTCCAAATCTGTCCCACAAATCATCTCCTCTGTGATTGGTCACGCGGTGTCGGAGGTGAAATCCTCGTCCCATAACTGCAATGGCCTCCGAAACAACCTCCGGAACCTCGACCCACTCGAACAGAGAGCCCTTGATGACTGTCTCAGACTGTTTGATGACACTGTCTACGAGCTCGACGCCACTGTGGCTGATCTCTCCGGCGCCGAAATAGGCTTTAGGCGTTACCGTGACTTGCAGACGCTGCTGAGTGGGGCAATGACTAACATGTACACGTGTCTTGATGGGTTTGCTTATAGCCGAGGGAATGTGAGGGAGAGGATCCAGGACAGGTTGTTTGAGATCTCGTGTCATGTTAGTAACTCACTGGCTATGCTCAAGAACGTGCCCAGCCTGAAGAAGAAAGCTTCGGACCCGGAGACCTTCCCGGAGTACGGAAACGTGAAAAATGGGTTCCCTTCGTGGTTGTACTCGAGAGAACGAAATCTCCTGGAAGCTAATGTGAATGAAACGAGGTTCGACCTTGTGGTGGCAAAAGATGGCACCGGCAATTTCACTACTATTGGTGAGGCTGTGAATGCAGCTCCCAACTCCAGCACAAGCAGGACTGTGATACACATAAAAGCCGGAGCGTACTTTGAGAATGTGGAGGTGATCAGGAAAAAGACCAATTTGATGTTCGTCGGTGATGGAATCGGGAAGACCATTGTGAAAGCCACTAGGAATGTCGTCGACGGATGGACGACTTTTCAGTCAGCCACCGTAGCGGTGGCGGGAACGGGATTCATAGCGAAGGGCGTGACGTTCGAGAACTCAGCAGGAGCGAGCAAGCACCAAGCCGTGGCTCTGCGAAACAGCGCCGATTTATCAGCATTCTACAAATGCAGCTTTATTGGCTATCAAGACACTCTCTACGTCCATTCCCTCCGACAGTTCTACCGAGACTGCGACATTTACGGCACCGTCGACTTTATCTTCGGCAACGCCGCCGCTCTCTTCCAAAACTGCAACTTATACGCCCGCAGGCCTCTCCTAAACCAGAAGAACATGTTCACCGCTCAGGGCAGAGACGACCCCAACCAGAGCACCGGCATTTCCATCCTGAACTGTAAAGTCGCCGCCGCCGAGGATTTAATCCCCGTCAAGTCCTCATTCAAGACCTACTTGGGACGCCCCTGGAAGCCCTATTCCAGGACGGTGTATCTGAGATCTCACATGGAGGATGTGATTGAGCCTGCTGGGTGGTTAGAATGGAACGGAACGTTGGGCTTGGACACGTTGTATTATAGGGAGTACATGAATAGTGGTCCTGGTTCTAATACGAGCGCCAGAGTGAGATGGCCTGGTTTCAGGGTCATCAACTCCTCCGCCGAGGCTTCTCAGTTCACCGCCGCTCGGTTTATTCAGGGATATGACTGGTTGAATTCCACTGCCATTCCCTTTTACCTTGACTTGAGCTGA 1674 0.5114 MYNLNTRSALSLALLLLLSLFSVLHFFQFHNASLSKTHLHLQTHLQVAQSTCQGTLYPKLCVSTLSSLPDLPSKSVPQIISSVIGHAVSEVKSSSHNCNGLRNNLRNLDPLEQRALDDCLRLFDDTVYELDATVADLSGAEIGFRRYRDLQTLLSGAMTNMYTCLDGFAYSRGNVRERIQDRLFEISCHVSNSLAMLKNVPSLKKKASDPETFPEYGNVKNGFPSWLYSRERNLLEANVNETRFDLVVAKDGTGNFTTIGEAVNAAPNSSTSRTVIHIKAGAYFENVEVIRKKTNLMFVGDGIGKTIVKATRNVVDGWTTFQSATVAVAGTGFIAKGVTFENSAGASKHQAVALRNSADLSAFYKCSFIGYQDTLYVHSLRQFYRDCDIYGTVDFIFGNAAALFQNCNLYARRPLLNQKNMFTAQGRDDPNQSTGISILNCKVAAAEDLIPVKSSFKTYLGRPWKPYSRTVYLRSHMEDVIEPAGWLEWNGTLGLDTLYYREYMNSGPGSNTSARVRWPGFRVINSSAEASQFTAARFIQGYDWLNSTAIPFYLDLS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0482 557 Pfam Pectinesterase 245 541 IPR000070 GO:0030599|GO:0042545
Alju01g0482 557 SUPERFAMILY Pectin lyase-like 244 554 IPR011050 -
Alju01g0482 557 SMART PMEI_2 43 196 IPR006501 GO:0004857
Alju01g0482 557 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 201 IPR035513 -
Alju01g0482 557 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 200 IPR035513 -
Alju01g0482 557 Gene3D - 240 556 IPR012334 -
Alju01g0482 557 CDD PMEI-like_3 50 202 - -
Alju01g0482 557 FunFam Pectinesterase 239 556 - -
Alju01g0482 557 NCBIfam pectinesterase inhibitor domain 17 199 IPR006501 GO:0004857
Alju01g0482 557 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Alju01g0482 557 PANTHER PECTINESTERASE 23 546 - -
Alju01g0482 557 Pfam Plant invertase/pectin methylesterase inhibitor 49 196 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0482 Alju-ChrAlju01 3618774 3622189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0482 73 556 Carbohydrate Esterase AT4G02320 53.307 0.0 539