Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0477 ATGTGTGGCGGTGCTATCATCGCCGACTTCATCCCCCGCCATCGCGACCGCCGCCTTACCGCCTCTGACATCTGGCCCAACTCTCTCGGTAAGCCCAATGATGATTCCGACTTCGACTTCCATTTTCCTCAGCCCGACCACTCTGCCTCCTGCAAATCATTGCATCATGTCCCAGGATCAGTTGATGAGCAAGCTGAGAAGCCCCCCGTGAAGAGGCAGAGGAAGAACCTCTACCGTGGGATCAGGCAGCGTCCCTGGGGTAAATGGGCTGCTGAGATTCGCGACCCCAGGAAGGGGGTTCGTGTTTGGCTTGGTACCTTCAACACTGCTGAAGAAGCCGCCAGGGCCTATGACAGAGAAGCTCGCAAAATCCGCGGTAAGAAAGCCAAAGTCAATTTTCCCAATGAAGACGATGCCTATTCCCTTCAGGCTCGTCGTAATAATCCACCGCCTCCGCTCCGATCCCCAATTTCTCCCCTGTATCCACAACAGTACGGCTCAAACTTGAACAATGTGCCTAAAAGTTTCAATCTAGAGTTTGGTTATGATCTGAACCAGACGGGCACAGTTCCTTCCCTTGGATTCGATGCCGATCCAACTCTTGTTTCTGGAGATGAGAATTCTGGATGCGGGTCAGGGTCTGCTTCCGAGGGTATCTACTCCACGGTGCAATTACTGGGCTCGGATCAGAAAGGAAACGGCTATTCCTCTCAGAGTTCGAATGTGGACGTGGAAGGAAAAGCGAACGAAGTGGTGATGGAAGCCGAGGAAGAGAAGAATGAGATACAGAAGCTGTCAGAGGAGCTGATGGCGTACGAGAACTACATGAAGTTTTATCAGATTCCGTATTACGACGGGCAATCAATGGCGTCCAATAATGTTCAGGAAAACGTGGTGGGTGATCTGTGGAGCTTCGACGACGAGGCCGTCCCTGCTTCGGCGACGTCATCGGCCCTGTGA 960 0.5271 MCGGAIIADFIPRHRDRRLTASDIWPNSLGKPNDDSDFDFHFPQPDHSASCKSLHHVPGSVDEQAEKPPVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDAYSLQARRNNPPPPLRSPISPLYPQQYGSNLNNVPKSFNLEFGYDLNQTGTVPSLGFDADPTLVSGDENSGCGSGSASEGIYSTVQLLGSDQKGNGYSSQSSNVDVEGKANEVVMEAEEEKNEIQKLSEELMAYENYMKFYQIPYYDGQSMASNNVQENVVGDLWSFDDEAVPASATSSAL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0477 319 ProSiteProfiles AP2/ERF domain profile. 77 134 IPR001471 GO:0003700|GO:0006355
Alju01g0477 319 MobiDBLite consensus disorder prediction 135 168 - -
Alju01g0477 319 Gene3D AP2/ERF domain 77 135 IPR036955 GO:0003700|GO:0006355
Alju01g0477 319 SMART rav1_2 77 140 IPR001471 GO:0003700|GO:0006355
Alju01g0477 319 Pfam AP2 domain 78 126 IPR001471 GO:0003700|GO:0006355
Alju01g0477 319 FunFam Ethylene-responsive transcription factor 2 76 135 - -
Alju01g0477 319 SUPERFAMILY DNA-binding domain 77 135 IPR016177 GO:0003677
Alju01g0477 319 CDD AP2 78 135 IPR001471 GO:0003700|GO:0006355
Alju01g0477 319 Coils Coil 248 275 - -
Alju01g0477 319 PANTHER DNA-BINDING DOMAIN 55 256 IPR044808 GO:0003700|GO:0009873
Alju01g0477 319 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Alju01g0477 319 PRINTS Ethylene responsive element binding protein signature 100 116 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0477 Alju-ChrAlju01 3583446 3584487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0477 1 135 AP2-EREBP Transcription Factor Family AT3G16770 54.348 3.67e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju01g0477 AP2 9.7e-13 CL0081