Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0467 ATGGCCACCAGAAATCGAACTGTGCTATTTAGAAAGCACAGAGATGCCGTCAAGAGTGTGCGAGCCCCTTTATCTTCCTCAGCTTCTGGTTCTGGCGGCCCCGTTATTGAAATGGTGAGCACTTCACTTCTTCGTTCGAATCAATCTTCATATGCTCCTCTAAGCACCGAAGATCCAGGCCCTTCGAGTTCGAGAGATGCATCCACTGTGGGGTTGCCGCCAGCTTGGGTAGATGATTCTGAAGAAATAGCTGCAAATATACAGCATGCTCGGGCTAAAATGTCTGAGCTAGTCAAACTTCATGCCAAAGCATTAATGCCCTCTTTCGGTGATGGTAAAGAAGATCAACAACAGATTGAGATTCTCACCCAGGAGATTACAACTCTCTTGAGAAAATCTGAGATGAAGCTAAAAAGACTTTCTGCCACTGGCGGGTCCTCTGAGGATTCAAACATTAGAAAAAATGTGCAGCGCTCCCTTGCTACAGACCTTCAGAACCTGTCAATGGACCTCCGGCGAAAGCAGTCACAATACTTGAAACGGTTGCAGCAGCAAAAGGAGGGATATGATGGGGTTGACTTGGAGATGAATGTGAACGGGTATAAATTTGGTTCGCAGGATGATGGATTCAGTGATGTGGGTTTCAGTGATCATCAAATGGCAAAGCTAAAGAAGAGTGAGCGATTCTCGGAGGAAAGGGAAAGAGAGATTGAACAGGTCACTAAATCAGTGAATGAACTGGCTCAGATCATGAAGGATCTCTCTGTTCTTGTGATAGACCAGGGAACAATTGTGGACAGAATTGACTACAACATTCAGAATGTCTCGACGTCCGTTGAAGAGGGCTTCAAGCAGTTGGAGAAGGCTGAGAGAACACAGAAAAAAGGAGGAATGGTTATGTGTGCAACTGTGCTTGTTATAATGTGCTTCGTCATGCTAGTCCTCTTGATACTCAAGGTGATATTGTTTTAG 972 0.4516 MATRNRTVLFRKHRDAVKSVRAPLSSSASGSGGPVIEMVSTSLLRSNQSSYAPLSTEDPGPSSSRDASTVGLPPAWVDDSEEIAANIQHARAKMSELVKLHAKALMPSFGDGKEDQQQIEILTQEITTLLRKSEMKLKRLSATGGSSEDSNIRKNVQRSLATDLQNLSMDLRRKQSQYLKRLQQQKEGYDGVDLEMNVNGYKFGSQDDGFSDVGFSDHQMAKLKKSERFSEEREREIEQVTKSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVSTSVEEGFKQLEKAERTQKKGGMVMCATVLVIMCFVMLVLLILKVILF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0467 323 Gene3D - 73 281 - -
Alju01g0467 323 SMART SynN_4 67 183 IPR006011 GO:0016020
Alju01g0467 323 MobiDBLite consensus disorder prediction 49 75 - -
Alju01g0467 323 SUPERFAMILY t-snare proteins 72 282 IPR010989 GO:0016020|GO:0016192
Alju01g0467 323 CDD SNARE_syntaxin16 239 288 - -
Alju01g0467 323 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 227 289 IPR000727 -
Alju01g0467 323 PANTHER SYNTAXIN 79 308 IPR045242 -
Alju01g0467 323 Pfam SNARE domain 263 315 IPR000727 -
Alju01g0467 323 MobiDBLite consensus disorder prediction 49 69 - -
Alju01g0467 323 SMART tSNARE_6 222 289 IPR000727 -
Alju01g0467 323 FunFam Syntaxin-43 73 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0467 Alju-ChrAlju01 3510816 3515350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0467 1 323 SNARE and Associated Proteins AT4G02195 70.462 4.24e-162 453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0467 01 3510816 3515350 Alju01g0467 01 3510816 3515350 ECH
Alju01g0467 01 3510816 3515350 Alju03g3195 03 56332779 56337344 ECH