Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0459 ATGAGCTTTGCTATTCGAAGCGCACGAGTAGAGGCAGCTAGGTATAGAAAGATGTCTGATGATAATGGCAGTGCACTAAAACTATTCGGTTTCCCACTGAGAGAGGAAGTGGAAGATGAGAGGAAATTCAGGTGCCATTATTGCAAGAAAGCATTCACAAACTCACAAGCATTAGGGGGTCACCAAAATGCTCATAAGAGAGAGCGCCAAAGAGCCAGGCGTTTCCATAGCCAACACACCGATCACAGACGCTTCATACCACAACCACCACCCTTCACCGCCGCGGCCGCCACCAACCACCGCCAACCACCACGCATGCTCTTCAAATCCAACACAACCCACTTTTCATCCACGCCCATTTTCATTCCTTCGCCTTATACTACTACTACTACTTCCAGGTTCCCATTTCAGCTCCAATATGCCTCACCCTCCCTACAACAATCATCGCCTTCTCATGTTGCTGCGCTAACGCCACAAAAGGATGTGGGTGTCAATGTTGATGTCCATCTAAGAATGGGCAGTTCTGTGTACTACTATGACCCAGTAGTTCAAATGTCGTATCTATGTTTCATCCTAGTGTTAGAAGTTAGAACCGTTTAG 600 0.4717 MSFAIRSARVEAARYRKMSDDNGSALKLFGFPLREEVEDERKFRCHYCKKAFTNSQALGGHQNAHKRERQRARRFHSQHTDHRRFIPQPPPFTAAAATNHRQPPRMLFKSNTTHFSSTPIFIPSPYTTTTTSRFPFQLQYASPSLQQSSPSHVAALTPQKDVGVNVDVHLRMGSSVYYYDPVVQMSYLCFILVLEVRTV 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0459 199 ProSiteProfiles Zinc finger C2H2 type domain profile. 43 70 IPR013087 -
Alju01g0459 199 Pfam C2H2-type zinc finger 43 67 - -
Alju01g0459 199 PANTHER ZINC FINGER PROTEIN 5 37 173 IPR044299 GO:0010090
Alju01g0459 199 SUPERFAMILY beta-beta-alpha zinc fingers 39 70 IPR036236 -
Alju01g0459 199 Gene3D Classic Zinc Finger 25 88 - -
Alju01g0459 199 ProSitePatterns Zinc finger C2H2 type domain signature. 45 65 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0459 Alju-ChrAlju01 3461572 3462249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0459 26 76 C2H2 Transcription Factor Family AT5G06650 44.286 1.00e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju01g0459 None None None