Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0442 ATGGTTGTGTTATCATTGACGCCATGCTGGTATGTTATGATCACACGCATTGAGCAGCGCGTTAATTCAAACTCACAGAATTTTCTCTTGGAATTACAAGATGAAATTGATCACTCTGCTAAATTATTACCCCCCTTGAAGTCAGCATCAGCCAACTTGTCACGAATTCTAAGTTCAACCTTCAACAAGACGACTAATATCTCATTCTCTGACATTAAGACCGAAGTGGCTCCGGTGTTATTTCGAGCATTTGAGATGATTCCTCAGTTGTCCGAAATCTCATACATTGGGATGGATGGTCTATTTTTCTCATACCACAAAGAACATGATCAAAATCTTGCAGTGTACTCTAACTCTTCCTTTTCTTCAATATCGAGTGCTTCACAAATCATTTACTATGTTCAGCCTGTAAATCTTGATACTGGAGGATTATATGGTGAAGCCGTAACATACAAGCACCCTGTTAATACAAGTTGGACCCAGGAAGCAGTCAATAAGTCCAACGGATATGCCACATTGGGATACAAGTGGAGTGACAATAATAAGATTTTATACCTTAATTTGGTCAGAATCTCAAGAACAGGATTTATCTCATTAGGACTTCCAGCAACGACAATCACAGACTTTGTCACCCCCACTATGCGTCAAGGTGCAAGCTTGTTGTATTTGGCTTCCAAAGATGGAGAAGTGCTTCTACAAGGAATCCAACATACCCATATTATATTCCATGATGATATGGCTTCCTTCTATTCTGTGAAACCAAATGATGATCTATTGGATCATCAGGGCACTGTCTCTTGTAAGGGTGAAGCCATTGCTTCTGTTTTGAAAATCCGGGATACTCAATATTTGACACGATGCTCATCAATTAATATAATGGGAGTAGAATCGGTGTACGTCTTGGCTGTCCCCCAAAATGGATTGGTGACCTATGTACATGATAGTAGAAAACGGGGTTTAGTGATGGTGAGTACAATGGTAGCAATGATAGTGGTCTCTATCATTAGTTTTCTTTTGTTAAATGCAATAATTGGTCGGCGAGAGATGCATTTGTGTGTGTCTCTAATCAAACAAATGGAAGCCACTCAGCAAGCAGAGAGGAAGAGTATGAATAAGAGCCTTGCATTTGCTAGTGCTAGCCATGATATTCGAGCTGCTCTTGCTGGTCTTACTGGTTTGATAGAGATGTCCAATGAAGAAGTTATCCCTGGCTCTGAACTGGAGGCCAATTTAAAACAAATGGGTGCTTGCACTGAAGACCTGCTAGGGCTGTTGAATTCTATTCTTGATACAAGTAAAATTGAGGCAGGGAAGATGCAGCTTGATGAAGAGGAATTTGATATATCCCAAGTCATAGAAGAAGCAATCGATTGGTACTATCCTATGGCTATGAAAAAAGGTGTCGATCTTGTCTTGGACCATTGTAATGGTTCGGTTATCAGATATTCTCATGTCAAAGGTGACAAGAGAAAGCTTAAACAAGTTTTGTATAATTTAGTGAGCAATGCTGTTAAATTTACAAATGTGGGACATATAGCAGTTCGAGCTTGGGCTCGAAAGCCAAGTTTCCAGAACTCAATAATGGCTTCTGAAAGATACAATTTTATCAAGCACTTGCCATGCTTATTTTACAAGAAAAATGAATCTAATGTAGAAATAGAAGTAAGAAATGCAATCCAACAAGATCCAAACTTGCTGGAGTTTGTGTTCGAAGTCGATGATACTGGAAAAGGAATTCCTAAAGAGAAGCATAAGTCAGTGTTTGATAATTACGTTCAAGTCAACGAAACTGCTTCACGACAAGGAGGCACTGGTTTGGGACTTGGTATTGTGCAATCACTGGTACGTCTGATGCATGGAGATATTGAAATTGTGGAAAAGGAAATAGGTGAAAAGGGATCATGCTTCAGATTCAATATCCTTCTTCACGTATGTGAGACAGTCACAGGTGTTGGTAACAATAGAGAAGATATTGAATTAGGAGGTGACATAAATCTCAATCAAATTCAAGGACAAGATATAATAAACACCCCTGGTTCTGGTTCTAGCATCTGTTCCCCCAGCCCAAAATTACCAATTTTTGCCTCTAGTAGGTCAGGGGCTTCTTGCATTGTTCTTTTGATACAAAATGAAGAACGACGAAGGACTAGTCGAAGGTTCATGGAGAGTTTAGGGATTAGTGTTAAGGTTGTGAAGCAGTGGGAACATTTGTCTCATACTCTTAAGAAGATCAAGAACAAGGGGGATAATTCTAGCCAGAGCTCTATAGGAACATCAGATACTAGTTCTAGGTCTACATCTCAAAATTCTAATTCCAGGGCCAAAGGATTTCCTTTGAGTGATACAGATGGAATTTACAACATGCCTTTGACTTCTAACAAGTTAGAAGATAGAGCTTCCCAGGGTTTGGTTCTGCTTGTGATTGATGCAATTGCAGGACCCTTTTCAGAACTTAGCAGAACGGTGTTTGCATTCAAAAAAGACCTTGGAAGTCCTTGCAGGGTGGTTTGGTTAAATAAGCCACTTGTGTGTGGGGAGAGTTTCAAAGCACTTGACGAGGATGCACTAGATCCTGATGACATTATCTTGTCCAAGCCATTTCATGGTAGTCGTTTGTTTGAAATTATAAAGCTTCTTCCTGAGTTTGGCGGTAGTTCAACTAATATATCAAGATTTGGAAAAGTAAGGAGGGACATTTTTCACAACAGACTTGGCAAACCATTCAAAGATTCCCACATATCAAGATATCGGTCACCTAAATCAGACACAGCAGAATTTTCCTCAGCTAATGCAACCTCATTTCAAGACTATGGTAGTTCATCAAGGAGGGATCAGCTATATTCTTCCAGGAGGTCCAAAGCAAGGAATTCTCAAATCGACGACAAAGAGATACAAGAGAGCAATGATTCAACCAATGACAAGCCCTTGGGTGGCAAGAGATTTTTGATTGTTGAGGACACCGGATATTTACGCATGATAGCTTTCAAGACTTTGATACAGCTAGGTGCAAGTGCAGCTAATGTGAATGAATGCGAGAATGGGGAAGAAGCAGTGAATCTAGTTGAAAAGAGTTTAAAAGGGGGTTTTCCTTATGATTGCATTTTAATGGACTGTGAGATGCCAGTAATGAATGGATTTGAGGCAACAAAGCAGATAAGGAAGATGGAGAAGAGGTATGGGGTTCACATACCTATCTTGGCCTTAACGGCTCATTCGTCAGGGCAGGAGATCAACATGACCAAGGAGGCAGGAATGGATGCTCACTTAGAAAAGCCACTTAGAGCACACTATTTACTGGCTTCCATTAAAAACATACACAATAATACAGACTGA 3333 0.3999 MVVLSLTPCWYVMITRIEQRVNSNSQNFLLELQDEIDHSAKLLPPLKSASANLSRILSSTFNKTTNISFSDIKTEVAPVLFRAFEMIPQLSEISYIGMDGLFFSYHKEHDQNLAVYSNSSFSSISSASQIIYYVQPVNLDTGGLYGEAVTYKHPVNTSWTQEAVNKSNGYATLGYKWSDNNKILYLNLVRISRTGFISLGLPATTITDFVTPTMRQGASLLYLASKDGEVLLQGIQHTHIIFHDDMASFYSVKPNDDLLDHQGTVSCKGEAIASVLKIRDTQYLTRCSSINIMGVESVYVLAVPQNGLVTYVHDSRKRGLVMVSTMVAMIVVSIISFLLLNAIIGRREMHLCVSLIKQMEATQQAERKSMNKSLAFASASHDIRAALAGLTGLIEMSNEEVIPGSELEANLKQMGACTEDLLGLLNSILDTSKIEAGKMQLDEEEFDISQVIEEAIDWYYPMAMKKGVDLVLDHCNGSVIRYSHVKGDKRKLKQVLYNLVSNAVKFTNVGHIAVRAWARKPSFQNSIMASERYNFIKHLPCLFYKKNESNVEIEVRNAIQQDPNLLEFVFEVDDTGKGIPKEKHKSVFDNYVQVNETASRQGGTGLGLGIVQSLVRLMHGDIEIVEKEIGEKGSCFRFNILLHVCETVTGVGNNREDIELGGDINLNQIQGQDIINTPGSGSSICSPSPKLPIFASSRSGASCIVLLIQNEERRRTSRRFMESLGISVKVVKQWEHLSHTLKKIKNKGDNSSQSSIGTSDTSSRSTSQNSNSRAKGFPLSDTDGIYNMPLTSNKLEDRASQGLVLLVIDAIAGPFSELSRTVFAFKKDLGSPCRVVWLNKPLVCGESFKALDEDALDPDDIILSKPFHGSRLFEIIKLLPEFGGSSTNISRFGKVRRDIFHNRLGKPFKDSHISRYRSPKSDTAEFSSANATSFQDYGSSSRRDQLYSSRRSKARNSQIDDKEIQESNDSTNDKPLGGKRFLIVEDTGYLRMIAFKTLIQLGASAANVNECENGEEAVNLVEKSLKGGFPYDCILMDCEMPVMNGFEATKQIRKMEKRYGVHIPILALTAHSSGQEINMTKEAGMDAHLEKPLRAHYLLASIKNIHNNTD 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0442 1110 ProSiteProfiles Response regulatory domain profile. 980 1106 IPR001789 GO:0000160
Alju01g0442 1110 CDD REC_hyHK_CKI1_RcsC-like 981 1102 - -
Alju01g0442 1110 SMART HisKA_10 371 437 IPR003661 GO:0000155|GO:0007165
Alju01g0442 1110 SUPERFAMILY CheY-like 976 1106 IPR011006 -
Alju01g0442 1110 CDD HisKA 372 433 IPR003661 GO:0000155|GO:0007165
Alju01g0442 1110 PRINTS Bacterial sensor protein C-terminal signature 568 582 IPR004358 GO:0016310|GO:0016772
Alju01g0442 1110 PRINTS Bacterial sensor protein C-terminal signature 602 620 IPR004358 GO:0016310|GO:0016772
Alju01g0442 1110 PANTHER TWO-COMPONENT HISTIDINE KINASE 17 1094 - -
Alju01g0442 1110 MobiDBLite consensus disorder prediction 744 780 - -
Alju01g0442 1110 MobiDBLite consensus disorder prediction 946 969 - -
Alju01g0442 1110 Gene3D - 956 1109 - -
Alju01g0442 1110 Gene3D - 439 648 IPR036890 -
Alju01g0442 1110 MobiDBLite consensus disorder prediction 920 945 - -
Alju01g0442 1110 MobiDBLite consensus disorder prediction 747 777 - -
Alju01g0442 1110 Gene3D - 358 438 - -
Alju01g0442 1110 Pfam Response regulator receiver domain 982 1102 IPR001789 GO:0000160
Alju01g0442 1110 ProSiteProfiles Histidine kinase domain profile. 378 644 IPR005467 -
Alju01g0442 1110 MobiDBLite consensus disorder prediction 911 977 - -
Alju01g0442 1110 SMART HKATPase_4 487 644 IPR003594 -
Alju01g0442 1110 SMART REC_2 979 1102 IPR001789 GO:0000160
Alju01g0442 1110 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 487 642 IPR003594 -
Alju01g0442 1110 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 359 439 IPR036097 GO:0000155|GO:0007165
Alju01g0442 1110 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 426 640 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0442 Alju-ChrAlju01 3353144 3357218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0442 10 1093 Histidine Kinase Gene Family AT2G47430 39.504 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju01g0442 HATPase_c 7.5e-26 CL0025