Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0437 ATGACCTCGAATCACCTTCCAGCAAGCTCGGGATCTGATGACCCAAGACCTGATGTCATGGACGAGAGGAAGAGGAAGAGGATGCAGTCTAACCGTGAATCCGCGAGGCGATCGCGGATGAAGAAGCAGAAGCAACTTGAAGATCTGACCAATGAGATCAGCCGATTGCAAAGTGCAAACAGTCTTTTAGTTCAGAACATAAAGGAGAAGGAGGATGCATACAATGAGATCGAATCCAACAACACTGTCCTTAGGGCGCAGACTATGGAGTTGTTCGAACGATTGCGTTTTCTGAACTCTATACTTGAGATCGCTGAAGAGATCAGCGGGCTCGCTGTTGAGATCCCCGAGATACCAGATCCTCTCCTGAAGCCATGGCAGCTTCCTTATCCGATACAGCCGATCACGGCTTCAGACTTCGTCCTGCATTGA 432 0.4931 MTSNHLPASSGSDDPRPDVMDERKRKRMQSNRESARRSRMKKQKQLEDLTNEISRLQSANSLLVQNIKEKEDAYNEIESNNTVLRAQTMELFERLRFLNSILEIAEEISGLAVEIPEIPDPLLKPWQLPYPIQPITASDFVLH 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0437 143 MobiDBLite consensus disorder prediction 1 47 - -
Alju01g0437 143 CDD bZIP_plant_GBF1 24 75 IPR045314 GO:0003700|GO:0006355
Alju01g0437 143 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Alju01g0437 143 MobiDBLite consensus disorder prediction 15 47 - -
Alju01g0437 143 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 84 IPR004827 GO:0003700|GO:0006355
Alju01g0437 143 Coils Coil 32 87 - -
Alju01g0437 143 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Alju01g0437 143 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 105 - -
Alju01g0437 143 SUPERFAMILY Leucine zipper domain 23 75 IPR046347 GO:0003700|GO:0006355
Alju01g0437 143 Gene3D - 21 75 - -
Alju01g0437 143 FunFam BZIP transcription factor 21 72 - -
Alju01g0437 143 Pfam bZIP transcription factor 23 81 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0437 Alju-ChrAlju01 3308810 3309241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0437 1 138 bZIP Transcription Factor Family AT3G62420 57.857 7.77e-48 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju01g0437 bZIP_1 7.6e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0437 01 3308810 3309241 Alju03g3050 03 55431550 55431993 CCT
Alju01g0437 01 3308810 3309241 Alju01g0437 01 3308810 3309241 ECH