Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0434 ATGGGAGCGACCATTTTTCTGTTACACCTTTCAATTGGTTCTTTCTCTGCAGAGAATTGGAAAGTAACCCAATCATATAAAAGTCAAATTCATCTGCAGCAGCAAGACGAGCCCAAATCTGATATCCAAACTCTAGAAGAGTTCAACATCGACCCTGCTCTGCAAATGACACCACCGTTTGACGAAATCGTGGGGCTAGAGAATCAGCAAGTGGCAAGTTCAGAACCAATTAACAATAAGCAGGTTCCCCAGTCTTCTTCTTTAGCATACTTGGAGCTTCTGAGTAATTACGCAAGCAGGTTCAAGAAGCTAAGGGTCCAAGACAGAACCCAACCGAACAATAACAGTGAAGCTCAAGTGGGTCGCCAGGAATTGTCAGCTGAAGAAATAATAAGAGTGGCTGGAGCAAGGTATGTACAATTCTCTTCTCATTGGTATGATAATTATTGCATGCCTCTGCACCCATATGCCTCTGGTCTCGTGGTTCTGTCTGAAGAAGAAAACAGAGATATTGGGCTTGCACAGTTTCTTCTCGCTGCGGCCGAGAGGGTTAGTTGCCAACAATATGAACGTGCGAGCAGGATGCTTCTTCATTGTCTATTTAATTCATCTCCAGGCGCAAATGCTGTACAGAGAACTATCTTTCACTTCGCTCAAGCTCTTGGAGAGAGAATCGAAAAGGAAACCGGGAACACCACTTTGATGGGTTGTGCTAAGAACACAGAGAAGGAGTTAATTCAAAAGATGGATACCTGCATAGCTCTTACTTGTCATCAGAAAATCCCATTCAACCAAGTGATGCAATTCACAGGCGTGCAAGCCATAGTAGAGCACATCGCATATGATACAAAAATCCATGTTATAGATCTTGAGATCAGGCATGGAATTCGGTGGACGTGCTTGATGCAGGCACTCGTAGGGAGGAATGAAAGGAAAGTGGAGCTGTTGAAGATAACAGCTATAGTAATCGCTGGCCAACCCACCATAGAAGAAACAGGCAAAAGATTGACGAGTTTCGCTAAATCGTTGAACTTGCCATTTGCATGTAAGCAAGTTTATGTTACAGATATGACAGAAATTACAGAACAACAGCTTGAAATTGAAGATGATGAAACTGTGGCTGTCTATTCTCCGCATGTACTTAGGACTATGGTATCAAGGCCTGCTTGCTTGGAGAGCCTGATGAGTGTTATAAGAAACATCAAACCAACTATAATGATAGTTCTTGAAGTGGACGCCAACCTTAATTCGTCCTCGTTTGCGATTCGCTTCATTGAAGCATTGTTCCACTACTCGGCGCTATTTGACTGCGTTGAGACCTGCCTAAAAGATGAAATTAGTGCCAGAATGGCGACGGAAGCAATATTTTCTGAAGGGATAAGAAACATTGTTGCAGCGGAAGGATGGGACAGAACAGTGAGGAATGTGGGGATAGAAGTATGGAGGAGGTTCTTTGCAAGGTACAAAATGGTGGAAATTGGATTTAGTGAGTCATCTCTGTATCAAGCTAGATTGGTGGCCAGAGAATTCGCTAGTGGCAAATTTTGCACTCTCGACGTAAATGGAAAGTGTCTTACAGTTGGGTGGAAGGGGACCCCTGTTCATTCTGTTTCAGCTTGGAGATTCCTTTGA 1632 0.4344 MGATIFLLHLSIGSFSAENWKVTQSYKSQIHLQQQDEPKSDIQTLEEFNIDPALQMTPPFDEIVGLENQQVASSEPINNKQVPQSSSLAYLELLSNYASRFKKLRVQDRTQPNNNSEAQVGRQELSAEEIIRVAGARYVQFSSHWYDNYCMPLHPYASGLVVLSEEENRDIGLAQFLLAAAERVSCQQYERASRMLLHCLFNSSPGANAVQRTIFHFAQALGERIEKETGNTTLMGCAKNTEKELIQKMDTCIALTCHQKIPFNQVMQFTGVQAIVEHIAYDTKIHVIDLEIRHGIRWTCLMQALVGRNERKVELLKITAIVIAGQPTIEETGKRLTSFAKSLNLPFACKQVYVTDMTEITEQQLEIEDDETVAVYSPHVLRTMVSRPACLESLMSVIRNIKPTIMIVLEVDANLNSSSFAIRFIEALFHYSALFDCVETCLKDEISARMATEAIFSEGIRNIVAAEGWDRTVRNVGIEVWRRFFARYKMVEIGFSESSLYQARLVAREFASGKFCTLDVNGKCLTVGWKGTPVHSVSAWRFL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0434 543 ProSiteProfiles GRAS family profile. 164 541 IPR005202 -
Alju01g0434 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 114 531 IPR005202 -
Alju01g0434 543 Pfam GRAS domain family 174 541 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0434 Alju-ChrAlju01 3289542 3291257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0434 161 542 GRAS Transcription Factor Family AT1G66350 28.982 6.42e-47 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju01g0434 GRAS 5e-80 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0434 01 3289542 3291257 Alju01g0434 01 3289542 3291257 ECH