Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0429 ATGGATGGGCGTCCTCCTTTACTAAAATGTGGGTGTAAGCTTCAACCTGATGTACATGTGCTTGCTGGAATTTTTGCTAAACTGTCCATATCTGAACTGTCTTGTGAAATTCCATTGATTCTTAGCAATTCCATTGAGATTGTGGCTGGAATTAAGATTCAACAGAATCAAGGATCAGAGAAAACGAAGATGAATCTGTCAGGCATCTTTTCTTTTGTTTTTACACTGCTAACACTTCATTTTGAAGCTCGTAAAGCCCTCACTTGTAGAGGCCCTCTCAGAACCATAACAGTCAGTCAATCAGGCAACGCACATTTCCAAACCATTCAAAGAGCAATTGATTCTGTCTCTTACAAAACGCAAAACATTCGATGGGTTCGCATCAAGATTTCTCCTGGAGTTTATAGACAACAGATCATAATCTCTCGACTTCAAAGTTGCATATACCTAGAAGGAGCTGGTAGCAAGTCAACCTTTGTGCAGTGGAATGGCCACGACGCACCGTTTACTACTCCTACTTTCATTTCAAAAGCAGACAACATTGTCGCAAAGGGCATTACTTTCATGAATACATTTAACCGCCCGGTTGATGATGATGAAGTGAGACTGGTGCCAGCAGAAGCAGCAAGAATAGAGGGAGACAAATGCGCTTTCTTCGAATGTGCTTTTCTTGGAGTGCAAGACACTCTCAACGACCACTCTGGTCGCCATTACTTTCACAAATGCTTCATCCAAGGCGCTATTGATTTCATATATGGGGGTGGCCGATCTCTCTATGAGGAATGCACTCTGTTCTTTTCAGTGGGGCGAGATCTTCCCAAAGGAAGGGGTGGTGTGTTCATTGCTCAAAAAAGGGAATCAAGAGAAGATCCGAGTGCGTTTGTGTTCTACAAATGTAACATAACTGGGAATGGAAAAGGAAAAGCTTATCTTGGGAGGGGATATAGGCCTTACTCTCGGGTCATCATCGCCGATTCATACATCGGCGACATAGTTTCGTCTGCAGGTTGGGATCCTTGGAGAGGCAGAAAGCGTGTACAAGACCTGACTTTTGTGGAGGAGGGATGTTGGGGACCGGGGTCCGGGAGGTCAAAACGAGTGCCTTGGATGAAACGTTTAAGAGGAAGCGCTCTTCGCCGATTTGCGGATAAGATCTTCATCGACCGACGAGGATGGATTAAAAGACTTCCAGTGAACTGA 1200 0.445 MDGRPPLLKCGCKLQPDVHVLAGIFAKLSISELSCEIPLILSNSIEIVAGIKIQQNQGSEKTKMNLSGIFSFVFTLLTLHFEARKALTCRGPLRTITVSQSGNAHFQTIQRAIDSVSYKTQNIRWVRIKISPGVYRQQIIISRLQSCIYLEGAGSKSTFVQWNGHDAPFTTPTFISKADNIVAKGITFMNTFNRPVDDDEVRLVPAEAARIEGDKCAFFECAFLGVQDTLNDHSGRHYFHKCFIQGAIDFIYGGGRSLYEECTLFFSVGRDLPKGRGGVFIAQKRESREDPSAFVFYKCNITGNGKGKAYLGRGYRPYSRVIIADSYIGDIVSSAGWDPWRGRKRVQDLTFVEEGCWGPGSGRSKRVPWMKRLRGSALRRFADKIFIDRRGWIKRLPVN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0429 399 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 92 394 - -
Alju01g0429 399 Gene3D - 93 399 IPR012334 -
Alju01g0429 399 Pfam Pectinesterase 96 387 IPR000070 GO:0030599|GO:0042545
Alju01g0429 399 SUPERFAMILY Pectin lyase-like 94 396 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0429 Alju-ChrAlju01 3255973 3260211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0429 94 343 Carbohydrate Esterase AT2G19150 40.800 5.97e-59 192