Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0427 ATGGGAGTTTCTTCACAGCCTTCCCTAGTTCCTGTTTCTTTCAAAGATTTGGTTAAGGTAGCTGATGATCAAGTTGAAACCAAGAACTCGTCGTCGTGTGGGTATCTGCAGAGAAAAGTGATGGAATCCCAGAGGGCAATGATGATGAGCAAGAAAAGCGTCAAGAGCAGAAGAAGGCGGGGAAGGATTGTAGTGAAGAGGAGGGCTCGCTTGGTGGAAAGTTCTAGAAGAAGAGCCAACAAGATAGAAAGAAGGGTGACCAAGTTGAAGAGGCTCGTACCCAACGGTGAGTCCGTGGGGTTGGATGGGCTCTTCAGGAAGACTGCCCATTACATTTTGACTTTGCAAATGAGAGTGAGAGTCATGCAGATTATGGCTAAGGTATTGACTGATTCTGACGGGTTTTGTTTTGTACCTTCTCCTGTATCTACTCACTCAGCTGGCGGTGGGTACTCTTATGCTTTAGTTTGGGACATTTCTGGTAAGAAATGGTGGGTCCAAGGCTCCACGCTAAAGTGCTTTCTTCCAAAATGGAAAGTTTCTACAGTGTCATCATATCATAGTGCAGTTTATGATATTCAAAGCAGTTCTGCTTTGAAGCTTGGACGTATTAGTGAGATAATGGAATGTAGATGA 636 0.445 MGVSSQPSLVPVSFKDLVKVADDQVETKNSSSCGYLQRKVMESQRAMMMSKKSVKSRRRRGRIVVKRRARLVESSRRRANKIERRVTKLKRLVPNGESVGLDGLFRKTAHYILTLQMRVRVMQIMAKVLTDSDGFCFVPSPVSTHSAGGGYSYALVWDISGKKWWVQGSTLKCFLPKWKVSTVSSYHSAVYDIQSSSALKLGRISEIMECR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0427 211 Coils Coil 72 92 - -
Alju01g0427 211 CDD bHLH_AtIBH1_like 71 126 IPR044549 GO:0006355
Alju01g0427 211 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 66 115 IPR011598 GO:0046983
Alju01g0427 211 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 43 129 IPR044660 GO:0006355
Alju01g0427 211 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 67 129 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0427 Alju-ChrAlju01 3223461 3225681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0427 72 133 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 60.317 9.41e-18 73.6