Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0426 ATGTGCGTTACGACGGAAGATGCGTCCGGGTCGGGTTACAATAATGGTTACCCATTATTATCGAATGCTTTTGAGTTTTCTGAAGTGGAAAAGAGCTCTCTTGGGTTTATGGAATTGCTGGGTCTCCAAGACTATAGCTCTCAGCTTCATTTGCCGTCACAGCAGCAAGTGTCAACTCTTAAAGACCCCTCTGCTCTGAAAGATCTGTCTGATACGGCCCAGGAGTGTTCCGAGGTCTCCAATCAACAACCTGCGACCCCCAACTCTTCATCGATTTCGTCGGCGTCCAGTGGGGCCGTCACCGTTAATGACGAATACAATAGAACTTCTGACCAACCTGAAGAACACTCCAAGACCAAGAAACTATTGAAAGCCAAGAAGATAAATCAGAAGAGACAGAGAGAGCCGAGATTCGCGTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTTAAAAACAGCCCCTTTCCCAGGAGCTATTATCGTTGCACCACCGCTTCATGTAATGTAAAGAAACGAGTGGAGCGATCGTTCAACGATCCTAGCATTGTAGTAACAACTTATGAGGGTCAGCACACACATCCAAGCCCAGTTATGCCTCGCTCCCACCTCGCCGGAATCGATGCTTCGCTTCAGGCAGGTGTCTCCGCTGGTTGTGCCACCTCCTTCGGTTCCCTGATGGCAGGAAACCTATTGTCCCAGTATCATTATCATCCTCAGCAACGACAACTTGTTCTCAATAATAGTAATAGTACACTATCGTCCTCGGGCTTTCCCAACAATAGCAATACTGATTCAACTTCAAAGAACGCTGCATTTGCTTTTGCTCATCAGGACAGAAGATTTTGTAATTCTGGAGCCACCGCAGCTTTTCTAAGAGACCACGGGCTTCTTCAAGATATTGTTCCTTCACATATGTTGAAAGAAGAGTAG 969 0.4665 MCVTTEDASGSGYNNGYPLLSNAFEFSEVEKSSLGFMELLGLQDYSSQLHLPSQQQVSTLKDPSALKDLSDTAQECSEVSNQQPATPNSSSISSASSGAVTVNDEYNRTSDQPEEHSKTKKLLKAKKINQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSFNDPSIVVTTYEGQHTHPSPVMPRSHLAGIDASLQAGVSAGCATSFGSLMAGNLLSQYHYHPQQRQLVLNNSNSTLSSSGFPNNSNTDSTSKNAAFAFAHQDRRFCNSGATAAFLRDHGLLQDIVPSHMLKEE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0426 322 Pfam WRKY DNA -binding domain 150 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g0426 322 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 80 264 IPR044810 GO:0003700
Alju01g0426 322 MobiDBLite consensus disorder prediction 71 107 - -
Alju01g0426 322 SMART WRKY_cls 149 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g0426 322 Gene3D WRKY domain 134 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju01g0426 322 ProSiteProfiles WRKY domain profile. 144 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g0426 322 PIRSF WRKY_txn_fact_IIc 1 322 IPR017396 GO:0003700
Alju01g0426 322 MobiDBLite consensus disorder prediction 71 130 - -
Alju01g0426 322 FunFam WRKY transcription factor 57 135 209 - -
Alju01g0426 322 SUPERFAMILY WRKY DNA-binding domain 141 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0426 Alju-ChrAlju01 3216388 3217891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0426 17 322 WRKY Transcription Factor Family AT2G47260 45.845 8.61e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju01g0426 WRKY 8.4e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0426 01 3216388 3217891 Alju03g3074 03 55577651 55579008 CCT
Alju01g0426 01 3216388 3217891 Alju01g0426 01 3216388 3217891 ECH