Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju01g0426 | ATGTGCGTTACGACGGAAGATGCGTCCGGGTCGGGTTACAATAATGGTTACCCATTATTATCGAATGCTTTTGAGTTTTCTGAAGTGGAAAAGAGCTCTCTTGGGTTTATGGAATTGCTGGGTCTCCAAGACTATAGCTCTCAGCTTCATTTGCCGTCACAGCAGCAAGTGTCAACTCTTAAAGACCCCTCTGCTCTGAAAGATCTGTCTGATACGGCCCAGGAGTGTTCCGAGGTCTCCAATCAACAACCTGCGACCCCCAACTCTTCATCGATTTCGTCGGCGTCCAGTGGGGCCGTCACCGTTAATGACGAATACAATAGAACTTCTGACCAACCTGAAGAACACTCCAAGACCAAGAAACTATTGAAAGCCAAGAAGATAAATCAGAAGAGACAGAGAGAGCCGAGATTCGCGTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTTAAAAACAGCCCCTTTCCCAGGAGCTATTATCGTTGCACCACCGCTTCATGTAATGTAAAGAAACGAGTGGAGCGATCGTTCAACGATCCTAGCATTGTAGTAACAACTTATGAGGGTCAGCACACACATCCAAGCCCAGTTATGCCTCGCTCCCACCTCGCCGGAATCGATGCTTCGCTTCAGGCAGGTGTCTCCGCTGGTTGTGCCACCTCCTTCGGTTCCCTGATGGCAGGAAACCTATTGTCCCAGTATCATTATCATCCTCAGCAACGACAACTTGTTCTCAATAATAGTAATAGTACACTATCGTCCTCGGGCTTTCCCAACAATAGCAATACTGATTCAACTTCAAAGAACGCTGCATTTGCTTTTGCTCATCAGGACAGAAGATTTTGTAATTCTGGAGCCACCGCAGCTTTTCTAAGAGACCACGGGCTTCTTCAAGATATTGTTCCTTCACATATGTTGAAAGAAGAGTAG | 969 | 0.4665 | MCVTTEDASGSGYNNGYPLLSNAFEFSEVEKSSLGFMELLGLQDYSSQLHLPSQQQVSTLKDPSALKDLSDTAQECSEVSNQQPATPNSSSISSASSGAVTVNDEYNRTSDQPEEHSKTKKLLKAKKINQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSFNDPSIVVTTYEGQHTHPSPVMPRSHLAGIDASLQAGVSAGCATSFGSLMAGNLLSQYHYHPQQRQLVLNNSNSTLSSSGFPNNSNTDSTSKNAAFAFAHQDRRFCNSGATAAFLRDHGLLQDIVPSHMLKEE | 322 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju01g0426 | 322 | Pfam | WRKY DNA -binding domain | 150 | 207 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Alju01g0426 | 322 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 80 | 264 | IPR044810 | GO:0003700 | |
Alju01g0426 | 322 | MobiDBLite | consensus disorder prediction | 71 | 107 | - | - | |
Alju01g0426 | 322 | SMART | WRKY_cls | 149 | 208 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Alju01g0426 | 322 | Gene3D | WRKY domain | 134 | 210 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Alju01g0426 | 322 | ProSiteProfiles | WRKY domain profile. | 144 | 209 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Alju01g0426 | 322 | PIRSF | WRKY_txn_fact_IIc | 1 | 322 | IPR017396 | GO:0003700 | |
Alju01g0426 | 322 | MobiDBLite | consensus disorder prediction | 71 | 130 | - | - | |
Alju01g0426 | 322 | FunFam | WRKY transcription factor 57 | 135 | 209 | - | - | |
Alju01g0426 | 322 | SUPERFAMILY | WRKY DNA-binding domain | 141 | 209 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju01g0426 | Alju-ChrAlju01 | 3216388 | 3217891 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju01g0426 | 17 | 322 | WRKY Transcription Factor Family | AT2G47260 | 45.845 | 8.61e-66 | 208 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Alju01g0426 | WRKY | 8.4e-27 | CL0274 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Alju01g0426 | 01 | 3216388 | 3217891 | Alju03g3074 | 03 | 55577651 | 55579008 | CCT | |
Alju01g0426 | 01 | 3216388 | 3217891 | Alju01g0426 | 01 | 3216388 | 3217891 | ECH |