Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0401 ATGGTGGCTGAAGCAGACGTTGTTTGTCAACAGAGCCTGCCTCTGTTGGATGTACAGTATATTCCTAAAGCATGCAGCATTCATGAGATCGAAGATCCACCTTTCGTTTCGCCATCACCCGGTCCTGGAAAAGTTCGTGCTTCTGATCCAGTCTTTGCCCAGTTACTGAATTCACAAACGATAATGAATTGAATAGCATCCCTCCGGACACCTTTTCCTCCAGAAAGGCTTGAGCGACTTCCCGACCTGGTCCATGTAGATGTTATAGCTGGAAAACCAGTTCCCGGTACTTCTGTTGATTCTGCTATTGTGCAGTTTGAACCCAGCATCCGTTCTGGTAGTTATGCTGACATTGGGCCGCGTAGATACATGGAAGATGAGCATATAATGATAGATGATTTGTCTTCTCACCTGGGATCACTTTATAAGTTCCCTAAACCCAGTGCCTTTTATGGGGTGTTTGACGGTCATGGAGGACCTGAAGCTGCAGTTTATATCCGTAAAAATGTGATAAGATTTATTTTCGAGGACGCCAGCTTCCCAGAGTCATCTGAAGTTGATAATGTTTTCTTACAAGACTTGGAGAACTCCCTTAGGAAGGCATTTCTTTTGGCCGACTCAGCTTTGGCTGATGATTGTAGCTTGAGTAGCTCATCAGGGACCACAGCACTCACGGCTTTAATATTTGGAAGGCTGTTGATGGTGACCAATGCTGGTGATTGTCGAGCAGTTCTTTGCCGTAAAGGGGAGGCGATTGACATGTCTCAAGATCACAGGCCTATATATCCATCAGAACGGAGGCGCGTTGAGGAATCAGGTGGTTTCATTGATGATGGTTATCTTAATGGGGTGTTATCAGTTACTCGAGCTCTAGGGGACTGGGACATGAAGCTCCCACGGGGTTGCCCCTCTCCTCTGATTGCAGAGCCAGAGTTCAGGCAAGTGGTTCTTACAGAGGACGATGAATTCCTCATCATAGGATGTGATGGGATTTGGGATGTTATGTCAAGTCAGCATGCAGCGAGTCTCGTTAGGAGAAGCCTGAGGCGTCATGATGATCCGGAGAAGGGCGCCAGAGACCTTGTCATGGAAGCGTTGCGCCTGAATGCGTTTGATAATCTCACAGTAATTGTTGTCTGCTTCACATCCCCTGATCACAGGGAACCATCACCCGCTCAGAGGTTGACCCGTTGTGGCCTCTCAACAGAAGCACTTGGTAGCTTGAAGAGTTTGTTGGAAGGCAATGCTAGCAACTGA 1257 0.4741 MVAEADVVCQQSLPLLDVQYIPKACSIHEIEDPPFVSPSPGPGKVRASDPVFAQLLNSQTIMNXIASLRTPFPPERLERLPDLVHVDVIAGKPVPGTSVDSAIVQFEPSIRSGSYADIGPRRYMEDEHIMIDDLSSHLGSLYKFPKPSAFYGVFDGHGGPEAAVYIRKNVIRFIFEDASFPESSEVDNVFLQDLENSLRKAFLLADSALADDCSLSSSSGTTALTALIFGRLLMVTNAGDCRAVLCRKGEAIDMSQDHRPIYPSERRRVEESGGFIDDGYLNGVLSVTRALGDWDMKLPRGCPSPLIAEPEFRQVVLTEDDEFLIIGCDGIWDVMSSQHAASLVRRSLRRHDDPEKGARDLVMEALRLNAFDNLTVIVVCFTSPDHREPSPAQRLTRCGLSTEALGSLKSLLEGNASN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0401 418 CDD PP2Cc 110 381 IPR001932 -
Alju01g0401 418 FunFam Probable protein phosphatase 2C 22 97 384 - -
Alju01g0401 418 PANTHER PROTEIN PHOSPHATASE 2C 107 379 IPR015655 GO:0004722|GO:0006470
Alju01g0401 418 Gene3D - 97 388 IPR036457 -
Alju01g0401 418 SMART PP2C_SIG_2 126 381 IPR001932 -
Alju01g0401 418 Pfam Protein phosphatase 2C 121 373 IPR001932 -
Alju01g0401 418 ProSiteProfiles PPM-type phosphatase domain profile. 111 381 IPR001932 -
Alju01g0401 418 ProSitePatterns PPM-type phosphatase domain signature. 150 158 IPR000222 GO:0043169
Alju01g0401 418 SUPERFAMILY PP2C-like 106 382 IPR036457 -
Alju01g0401 418 SMART PP2C_4 101 379 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0401 Alju-ChrAlju01 3048592 3050779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0401 124 414 PP2C-type Phosphatase Gene Family AT3G62260 68.707 1.97e-144 411