Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0392 ATGGATGACTGCTGTGCTGTTTGCGCCGAACCTTTGGAATGGGTTGCGTACGGTCCCTGTTTGCATCGGGAGGTTTGCTCGACCTGCGTAGCTCGTCTCCGTTTCATATGCGACGATCGCCGTTGTTGCATCTGCAAGACCAAGTGCGACCGTGTTTTTGTCACAAAGGCTCTAGGAGATTTTACAAGGGTGATTAATAACTTCTCAGTGCTCCCATCTGATGTGAGGGAGGGTCAGGTGGGTTCGTACTGGTACCATGAAGATACAAATACTTTTTTTGATGATGTGGATCACTACAAGATGATCAAGGCTATGTGCAAGCTTTCATGTAGTGTGTGCGACAAGATGGAGGAGCAAGCACCTGATGCCTCAAAGCGTCGAGCAAGGTTTAGGAATATAGAACAGCTAAAGGGTCACTTGTTCCGCTTTCACAGGTTGCTCATGTGCAGTTTATGTTTGGAAGGAAGGAAGGTATTCATTTGTGAACAAAAGCTATATACTAGAGCACAGTTAAATCAGCATATAAGTACAGGTGATTCTGAGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTTATGGGGCATCCTATGTGTGAATTCTGCCGAACCCCATTTTATGGGGACAATGAACTCTACACTCATATGTCGACAGAACATTTTACTTGTCATATATGCCAAAGGCAACATCCAGGACACTATGAATATTATAAGAATTATGATGACTTAGAGACCCACTTCCGTCAAGAACACTTCTTATGTGAAGATGAAGCCTGCCTTGCTAAAAAGTTCATTGTATTTCAATCTGAAGCAGAGATGAAGAGGCATAATGCCATTGAACACGGCGGGCGAATGTCAAGGTCAAAACGCAATGCTGCTCTTCAGATTCCAACTAGCTTCCGATACAGACATGGTAATCAACAAGATCAACGGCGTGGAAGAGGTCGGACATTTCGTCGTGATCTTTCTGAAAGTGAACTTTCTATAGCCATTCAAGCCAGTTTTGACACTGCTAGTGTAGAGAGCACGAGTCATGATCCAGGTACATCAAGCAGTGGACAAGTAGCTGTTGGTTATGGGAACTTCGATGATGAGCCAGGCATCCAATCATCTGAATCCTTAGGTACATCAAGTTCTGAATTGTCTTCAAGGTACCTCCAGGCCTTGGGACATAATTCAAGGAGTTCACCATTGGAAGGTTCCTCCTTTCCTCCACTTCCCATAGCATCAATCAATGGCCAAGCAAAGCCCAAAAATGAGCCTGAAGGTTCATCTAGTAACACTATGGCAGCACATTTGCGTCGGCATAACAACAGAAATGCATCTGCTCTTGATTCTGCTAATGGATGGCCAGTTGCAATTCGTGGATCTGTGCAATCATCAAGTGATCCTATGCGGTCTAGAAGGCCAACAAATGTTGCTCCTGGAGTGTTAGGTAATTCCAGTCAGGCAAAGATTGTCATTAATCATGGACCCGCACCTTCAACCTATGCTAGTTCTGTCCAGGCTACACAGAGAACTGCTCATGGGCATTTGTCTCCTGGCACGGCAAGAGAAATGCGTGACAATGGTAGGATCATTCATTCTGCATCTGCTCCAAATCTCATTGAAAGTGGTTCTTTGGAACACTCCTTTTCTGATTTTCCTCCAGTATCAGCTACAAAAGCAAACAAGTTGCCTGGAAGTAGCCAGTCTTTGGCAAAGACAAATGTGGAGGATGTTCATTCTGCTAACAAGTCATTGGTTGAAAAGATTTGTGGTGCCCTTGATTTTGACCAAGACAGATTCACCATTTTTAAAGACATTTCTGCGCAATATCGCCAAGGAATAATTGATACAGGCACATATTTGGTTTATGTGCAGCAGTTTGGCTTGTCTCATCTTGTACTTGAGTTAGCTAGACTGTGCCCTGATCCACAGAAGCAGAAAGAACTCGTTGATTCTCACAATGCGAGTTTGCAAGGAATTGCTTTACAAGAAAATGATCGGGGTGGCGGTAGTATCCATCACAAAGATGGCAAGGTCTCCAAGAAAAGTAAAGGTAAAGGGAAGTCTATAGATATTGAAGAGAGGAACTGTAAAGATAATTTAGAAGATAGCTTTTTAAGCACTGTACGCCAATTACAGTTGAATCATAAACCTTCAGAAGAGAATGTGGAGGTACTATCAAAGGGTGATTACCGTATTGCCAAAGGTAAGTCAAAAATTTTGGCTGATGAACAATTGATTGGTACGAATTCTCGTAGTCTACCCAACCCAAAGCAGGCTGAGCAGCGTGAAGCATCACTTGGCAGTTTTCCTAGCCAAAGTAAAGATGAGGGGGCTAGTGGGATCAAGCAACGCAAGAAAACTTCTAAGTTTATTAGAATGCGCCTTGGTGATGGTTCTGTAGAAGCATTGTTGGATCCTAAAAGTTCAAATGCCAACTCAGATCCCGGATCAATAGACGCCTTGGATGGTAATAAGAACGGTGCTGGAGGGCTGCCTGTGCGAGGTGTTTGGCAGAATAGAGGAGGTCATAAACTCTTTTCCTAG 2532 0.438 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRRCCICKTKCDRVFVTKALGDFTRVINNFSVLPSDVREGQVGSYWYHEDTNTFFDDVDHYKMIKAMCKLSCSVCDKMEEQAPDASKRRARFRNIEQLKGHLFRFHRLLMCSLCLEGRKVFICEQKLYTRAQLNQHISTGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHFTCHICQRQHPGHYEYYKNYDDLETHFRQEHFLCEDEACLAKKFIVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYRHGNQQDQRRGRGRTFRRDLSESELSIAIQASFDTASVESTSHDPGTSSSGQVAVGYGNFDDEPGIQSSESLGTSSSELSSRYLQALGHNSRSSPLEGSSFPPLPIASINGQAKPKNEPEGSSSNTMAAHLRRHNNRNASALDSANGWPVAIRGSVQSSSDPMRSRRPTNVAPGVLGNSSQAKIVINHGPAPSTYASSVQATQRTAHGHLSPGTAREMRDNGRIIHSASAPNLIESGSLEHSFSDFPPVSATKANKLPGSSQSLAKTNVEDVHSANKSLVEKICGALDFDQDRFTIFKDISAQYRQGIIDTGTYLVYVQQFGLSHLVLELARLCPDPQKQKELVDSHNASLQGIALQENDRGGGSIHHKDGKVSKKSKGKGKSIDIEERNCKDNLEDSFLSTVRQLQLNHKPSEENVEVLSKGDYRIAKGKSKILADEQLIGTNSRSLPNPKQAEQREASLGSFPSQSKDEGASGIKQRKKTSKFIRMRLGDGSVEALLDPKSSNANSDPGSIDALDGNKNGAGGLPVRGVWQNRGGHKLFS 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0392 843 MobiDBLite consensus disorder prediction 657 686 - -
Alju01g0392 843 MobiDBLite consensus disorder prediction 454 477 - -
Alju01g0392 843 MobiDBLite consensus disorder prediction 801 815 - -
Alju01g0392 843 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Alju01g0392 843 PANTHER ZINC FINGER PROTEIN 598 1 749 IPR044288 GO:0061630|GO:0072344
Alju01g0392 843 SMART c2h2final6 220 250 IPR013087 -
Alju01g0392 843 SMART c2h2final6 251 280 IPR013087 -
Alju01g0392 843 SMART c2h2final6 196 219 IPR013087 -
Alju01g0392 843 SMART c2h2final6 108 144 IPR013087 -
Alju01g0392 843 MobiDBLite consensus disorder prediction 390 427 - -
Alju01g0392 843 MobiDBLite consensus disorder prediction 299 322 - -
Alju01g0392 843 MobiDBLite consensus disorder prediction 739 773 - -
Alju01g0392 843 MobiDBLite consensus disorder prediction 337 356 - -
Alju01g0392 843 MobiDBLite consensus disorder prediction 337 378 - -
Alju01g0392 843 CDD RING-HC_ZNF598 3 54 IPR041888 -
Alju01g0392 843 MobiDBLite consensus disorder prediction 304 322 - -
Alju01g0392 843 MobiDBLite consensus disorder prediction 739 843 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0392 1 843 C2H2 Transcription Factor Family AT3G62240 53.326 0.0 807
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0392 01 2995114 2999876 Alju01g0392 01 2995114 2999876 ECH