Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0389 ATGGAAGCTAGATCTGGCCCTGAAGCTTTTCACTTCTATGGAATTGGGTCATCGGACTTGCGGGGAGTGGGGAAGAGGTCCGTTGAATGGGATTTGAACGATTGGAAATGGGATGGTGATCTTTTCATAGCTAGCCCGCTGACACCAGTGCCTGAAGATAGCGTAGGCCGACAATTTTTCCCTCTTGGGTCTGGGATCCCCATGGCCGGAGGGTCCTCTAACAGTTCTTCCTCCTGCTCGGATGAAGTAAATCTAGGGATTGACAAGCCGAAGGACGGAGAAAGGAAAAGGAGGGTTATTGTGGTGGATGATGACAGCTTGAATGAGGGAGCAGGTGGCCTTAGCTTAAAGATTGGGGGCCATGATTCTCCAATTGTTGATAGGGAGATGGCAACTTGGGAAGGAATGAATGGAAAGAAAACCAGATTAGCTGGAGGCGCTTCAAATCGAGCGGTTTGTCAGGTGGAGGACTGTGGCGCAGATCTGAGCAGTGCTAAGGATTATCATAGGCGCCATAAAGTTTGTGAGATGCATTCAAAGGCCAGCAGGGCACTTGTGGGGAATGTAATGCAGCGGTTCTGTCAGCAGTGTAGTCGGTTTCACATCCTTCCGGAGTTTGATGAAGGAAAGAGAAGTTGTCGAAGACGCTTGGCAGGCCACAATAAAAGGAGGAGGAAAACAAATAATGATGCTGTTCCTAATGGCAGTTCAATAAACGATGATCAGACTAGCAGTTACCTTTTGATTACATTGTTGAAGACACTTTCAAATATGCATTCTAACAGGTCAAATCAGACCACGGATCGAGATTTGCTATCTCATCTTGTAAAGGGCCTAGCTAGTCAAAATGGTGAACATGGGGCCAAGAGCTTGTCTAACCTTTTGCGGGAACCAGAGAATTTGTTGAAAGAAGGGAGTTCTCCTGATAAGTCAGATATGGTTTCTGCTTTATTCTCTAATGGTTCTCAAGTCTCTCCAACTGTTATGAGACAAGCACAAACAATATCTATGACTGAAATTCAACATCAAGGGATGCATGATACTGGGGCTGCTGACCAACAAACCATGTCTTCTACTAAACCTAGCATTACAAACAGTCCTCCAGTTTACTCAGAAGCCAGGGACAGTGTTGCTGGACAGGTCAAGATGAATAATTTTGATTTGAATGACATATATATTGACTCAGATGATGGCATAGAAGATATTGAAAGATTTCCTGTCTCTGCAAACCTTGGGGCTAGTTCTCTTGATTACCAGTGGGCACAGCAAGACTCTCATCAATCAAGCCCACCTCAGACAAGTGGAAATTCAGATTCTGCATCTGCTCAGTCCCCTTCTAGTTCAAGTGGAGAAGCTCAGAGCCGCACAGATCGAATCGTTTTCAAGCTCTTTGGTAAAGAACCGAATGATTTTCCTCTTGTACTTAGAGCACAGATTCTTGACTGGCTATCCCACAGTCCTACTGACATTGAGAGCTATATACGGCCTGGATGTGTTGTTTTGACCATTTATCTACGTCAGACGGAGGCTGTGTGGGAGGAGCTTTACTATGGTCTCACTTCAAGTTTGAATAGGCTTATCGACGTCTCTGATGGTGACTTTTGGAAAACTGGATGGGTTTACACAAGAGTGCAGCATCAGATAGCCTTCATTTTCAATGGTCAGATTGTCATAGACAGATCCTTACCTGTAAGAAGTAAAAATTATAGTAAGATTGCGAGTGTTAGTCCAATTGCTGTACCGTCATTCAAAAGAGCTCAATTTTCAGTCAAGGGTGTTAATCTGATTCGCCCAGCCACTAGGTTATTATGCGCTCTAGAAGGGAAATATATGATCTGTGAAGATGCTCAGGAGCCGATGGAGCAGTGCTCCAAAGAGCTTGATGAGCTCCAGTGTGTCCAATTTTCATGTTCTGTTCCTGTGATGAATGGAAGAGGATTTATTGAGATTGAGGACCAGGGCTTGAGCAGCAGCTTTTTTCCTTTCATAGTTACAGAAGAGGATGTTTGCTCAGAAATCTGTGCACTTGAGCCTCTACTAGAATCAGGCAAAGCTGACTCTGATATTGGAGGATCTGGAAAATTTATGGCCATAAGTCAAGCCATGGATTTTATTCATGAAATGGGATGGCTGCTCCACAGGAGTCAATTGAAATCTAGGCTGGTTCAGCTAAACTCTAATGTAGATCTTTTTCCATTAAAACGGTTCAAGCAGCTCATGGAGTACTCTATGGACCATGATTGGAGTGCAGTGGTGAAGAAACTATTGAACCTATTACTTGATGGAACTGTGGATGCAGGAGATCACCCATCCCTATATCTGGCACTTTCTGAGATGGGTCTCCTTCATAAAGCTGTAAGGAGGAATAGCAGGCAGTTGGTGGAGTTGCTTTTGAGATATGTGCCAGAGAAAATTTCTGATAAACTAGGACCAGAAAACGAGGCACTAGCTGATGTTGGGAACCAGAGCTTCTTGTTTAGACCTGACATTGTTGGTCCTGCAGGCTTGACACCACTTCATATTGCAGCTGGGAAAGATGGCTCTGAGGATGTGTTGGATGCTTTAACAAATGATCCTTGCATGGTAGGAATTGAAGCATGGAAGAGTGCACGTGACAGCACAGGCTTTACTCCTGAAGATTATGCACGCTTACGTGGTCATTATGCATACATTCACTTGGTTCAGAAGAAAGTCAACAAGAGACAAGCAGCAGCAGCATCTCATGTGCTAGTAGATATCCCCAGTAATCTGAGCGAGTCTAGTATACATCAGAAGCAAACTGAGACTTCCACTACCTTTGAGATCGGAAAGGTGGATGGAAGCAGTGCGCAAGGGCATTGCAAACTTTGCGACCTTAAATTGTCTTGTCGGACTGCAGTTGGAAGGTCTTTTGTGTACAAACCTGCCATGCTTTCAATGGTGGCCGTAGCAGCGGTGTGTGTCTGCGTGGCCCTTCTGTTCAAAAGCTCGCCTGAAGTTCTGTATGTGTTCCAACCCTTCCGGTGGGAGTCGCTGGATTTCGGAACAAGATGA 3033 0.4484 MEARSGPEAFHFYGIGSSDLRGVGKRSVEWDLNDWKWDGDLFIASPLTPVPEDSVGRQFFPLGSGIPMAGGSSNSSSSCSDEVNLGIDKPKDGERKRRVIVVDDDSLNEGAGGLSLKIGGHDSPIVDREMATWEGMNGKKTRLAGGASNRAVCQVEDCGADLSSAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHILPEFDEGKRSCRRRLAGHNKRRRKTNNDAVPNGSSINDDQTSSYLLITLLKTLSNMHSNRSNQTTDRDLLSHLVKGLASQNGEHGAKSLSNLLREPENLLKEGSSPDKSDMVSALFSNGSQVSPTVMRQAQTISMTEIQHQGMHDTGAADQQTMSSTKPSITNSPPVYSEARDSVAGQVKMNNFDLNDIYIDSDDGIEDIERFPVSANLGASSLDYQWAQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPTDIESYIRPGCVVLTIYLRQTEAVWEELYYGLTSSLNRLIDVSDGDFWKTGWVYTRVQHQIAFIFNGQIVIDRSLPVRSKNYSKIASVSPIAVPSFKRAQFSVKGVNLIRPATRLLCALEGKYMICEDAQEPMEQCSKELDELQCVQFSCSVPVMNGRGFIEIEDQGLSSSFFPFIVTEEDVCSEICALEPLLESGKADSDIGGSGKFMAISQAMDFIHEMGWLLHRSQLKSRLVQLNSNVDLFPLKRFKQLMEYSMDHDWSAVVKKLLNLLLDGTVDAGDHPSLYLALSEMGLLHKAVRRNSRQLVELLLRYVPEKISDKLGPENEALADVGNQSFLFRPDIVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKSARDSTGFTPEDYARLRGHYAYIHLVQKKVNKRQAAAASHVLVDIPSNLSESSIHQKQTETSTTFEIGKVDGSSAQGHCKLCDLKLSCRTAVGRSFVYKPAMLSMVAVAAVCVCVALLFKSSPEVLYVFQPFRWESLDFGTR 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0389 1010 MobiDBLite consensus disorder prediction 420 454 - -
Alju01g0389 1010 Gene3D - 752 911 IPR036770 -
Alju01g0389 1010 FunFam Squamosa promoter-binding-like protein 14 144 214 - -
Alju01g0389 1010 SUPERFAMILY Ankyrin repeat 778 893 IPR036770 -
Alju01g0389 1010 SUPERFAMILY SBT domain 151 231 IPR036893 GO:0003677|GO:0005634
Alju01g0389 1010 MobiDBLite consensus disorder prediction 217 238 - -
Alju01g0389 1010 Gene3D - 144 214 IPR036893 GO:0003677|GO:0005634
Alju01g0389 1010 MobiDBLite consensus disorder prediction 344 370 - -
Alju01g0389 1010 ProSiteProfiles Zinc finger SBP-type profile. 150 227 IPR004333 GO:0003677
Alju01g0389 1010 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 76 893 IPR044817 GO:0003677
Alju01g0389 1010 Pfam SBP domain 153 226 IPR004333 GO:0003677
Alju01g0389 1010 MobiDBLite consensus disorder prediction 70 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0389 Alju-ChrAlju01 2969855 2976115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0389 24 1009 SBP-box Gene Family AT3G60030 55.976 0.0 974
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Alju01g0389 SBP 1.3e-29 No_clan