Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0385 ATGAACAAGATATTCCTGCCCGGGGTTGCACTCATATTGGTCGTAGGCTGTGCCGTCGGGACTATTCTTGTCGTCAGACAAGGTAAAAGTAGCGATGACAGTGGCCGCGGCAGCGGGTTGGCCACTCATAGCAAGGCGGTGACGGCGATTTGCCAAGGCTCCAACCACCAGAAGGAATGCGAAGATACTTTGGGGGCCGTCAATTCGACGGACCCAAAAGATTACATTGCGGTGGTGGTAGCGAAAGCGATGCAAAAGGTGATAGGCGCCGCTAACATGAGCGACCAGCTCGCCGTCGAACATAAATCCGGCGAAGAAGGCGTTAAGATGGCCATAGAAGATTGCAAGGACCTGTTGCAGTCAGCAATTGATTCACTGGAGGCCTCTAATATGATGATCAAAGGCGGCGATATTCGAAGCATCGAAGACAGAACCGACGACCTCAGGAACTGGTTGGCTATGGTGTTATCGTTCCAACAGTCATGCTACGACGGGTTCGAGGACAAAGGCGGAGAAAAAGAGGTGAGAGATACGCTGCACACAGAAGGTGGTCTGGACAGCATACAGAAGCTTACCGCAGTGGCGCTGGATGTTCTCTCCGGCATCAACAATCTGCTTTCTGCATTCAATTTGGATTTGACGCTGAAGGTTCCGTCTCGTCGTCTCCTGGAAGAAGAAGAAGATCCCAGTTGGATGCATGAAGGTGATCGCAAGCTCTTGGGATCCGACCCGGAACCCAACGCAGTGGTGGCCCAAGATGGCAGTGGTCAATTTAAAACCATCACCGATGCTATTAAATCGTACCCCAAGAAACACCAAGGCAGATTCGTTATCTACGTCAAAGCTGGAATTTATAAAGAGTACCCTTTAGTTGACAAGAAAAAGCCCAATATTTACATGTACGGAGATGGCCCTACAAAAACCATCATCACTGGAAACAGATGCGTCGAGCCCAAGAAGAAGTATAAGACCTTCACAAGTGCCACCTTCGCTGTTGCCGGAGACATGTTCATTGCCAAGGGAATAGGATTCGAGAACACAGCTGGGTCTGTCGGACATCAAGCAGTGGCGCTTCGGACGCAAGCACCACATGCAGCTTTTTACCAGTGCGCATTCCGAGGTTTCCAGGACACCTTGTACGTGCAAGCAGGGATTCAGTTGTTCCGCGAGTGTGAAATAACAGGAACTATCGACTTCATTTTTGGTGCCTCTAGAACTCTGATACAGAAGTCACAGATCATTATGAGGAAGCCAATGGAGAACCAACAGAACATAGTGGTAGCAGATGGGTCCTTGGATCCTAAGGCAGGAACTGGAGTTGTGATTCAGAACAGTGACATCTCTCCAGAGCCGGGGCTTGACAAGAATGTGAATCCTTGCTACTTGGCAAGGCCATGGAAGGCTTACTCTAAGGCCATCTTCATGGAAAGTACTGTTGGTGGTCAGATTCATCCAGATGGATATCTTCCTTGGACTGGTGATATGTTCCTAAAAACATGTTACTTCGCTGAGTATGCCAACACTGGACCTGGTTATAGTCCTCGCACCAGGGTCAAGTGGGGTCGAGGCCAGCTTACAAAGGATCAAGCTTCTGCATATACTGCTACTCGATACCTTGAAGGTGCTGGCGTCCCATGGTTGGCTTCCACTGGTATTCCTTATGATCCTAGCTTCACCAAGTCTTAA 1686 0.4941 MNKIFLPGVALILVVGCAVGTILVVRQGKSSDDSGRGSGLATHSKAVTAICQGSNHQKECEDTLGAVNSTDPKDYIAVVVAKAMQKVIGAANMSDQLAVEHKSGEEGVKMAIEDCKDLLQSAIDSLEASNMMIKGGDIRSIEDRTDDLRNWLAMVLSFQQSCYDGFEDKGGEKEVRDTLHTEGGLDSIQKLTAVALDVLSGINNLLSAFNLDLTLKVPSRRLLEEEEDPSWMHEGDRKLLGSDPEPNAVVAQDGSGQFKTITDAIKSYPKKHQGRFVIYVKAGIYKEYPLVDKKKPNIYMYGDGPTKTIITGNRCVEPKKKYKTFTSATFAVAGDMFIAKGIGFENTAGSVGHQAVALRTQAPHAAFYQCAFRGFQDTLYVQAGIQLFRECEITGTIDFIFGASRTLIQKSQIIMRKPMENQQNIVVADGSLDPKAGTGVVIQNSDISPEPGLDKNVNPCYLARPWKAYSKAIFMESTVGGQIHPDGYLPWTGDMFLKTCYFAEYANTGPGYSPRTRVKWGRGQLTKDQASAYTATRYLEGAGVPWLASTGIPYDPSFTKS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0385 561 ProSitePatterns Pectinesterase signature 2. 393 402 IPR033131 -
Alju01g0385 561 Pfam Plant invertase/pectin methylesterase inhibitor 46 197 IPR006501 GO:0004857
Alju01g0385 561 Pfam Pectinesterase 247 541 IPR000070 GO:0030599|GO:0042545
Alju01g0385 561 FunFam Pectinesterase 4 244 558 - -
Alju01g0385 561 NCBIfam pectinesterase inhibitor domain 41 174 IPR006501 GO:0004857
Alju01g0385 561 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Alju01g0385 561 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 177 IPR035513 -
Alju01g0385 561 PANTHER PECTINESTERASE 18 548 - -
Alju01g0385 561 SMART PMEI_2 42 198 IPR006501 GO:0004857
Alju01g0385 561 CDD PMEI-like_3 49 202 - -
Alju01g0385 561 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 203 IPR035513 -
Alju01g0385 561 SUPERFAMILY Pectin lyase-like 244 554 IPR011050 -
Alju01g0385 561 Gene3D - 241 558 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0385 Alju-ChrAlju01 2938511 2940361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0385 3 558 Carbohydrate Esterase AT5G49180 37.937 6.14e-123 372