Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0383 ATGTTAATAAATTACTCTCAAGTTTCCGCTTTACGCCGCAAGTATCCCATCTCGTCCACTCACACAATTCCCCAAATTTTTTTATGCTGGTTTTTCTTTCCTCACATGGAAGATGAATCTTTTCTTTCCTGGCAAACAAGGACCCAATTTGAACCCATAACCGAGAATCGAGTTCCCGATTTATCCTTCAGTAGCTCTCATTCCTTCAACGAATTCATCTCTTTACAGGAAGCCCGGATAGACCCACAATCCTCTTCTCAATTATTGACTCAGGATGCCCCCAAGAAGAAACTTACTCGCTGCAAGACGGCCCCTGCCATGGTTGTTTTGCAAGACTTGAGACAAAAATCTCCCGATGTTGTCAAACCACAGTCTAGCTCCATCATCAGGCAAGGCATTTGCTTGCTTATGATGTATCTTTCAGTCGGGGTTGTCATATACTCCTTCAATCGGGACCATTTTTCGGGTGCTGAGACTCACCCAGTAGTTGATGCGCTTTACTTTTGTATAGTCACCATGTGCACAATCGGTTACGGAGACATCACACCGACATCCCCAGTGACCAAGGTCTTTGCCTGCATCTTTGTCTTAGTAGGGTTTGGATTCATTGACATATTGCTTAGCGGGCTTGTTAATTACGTGCTAGATTTGCAAGAGAACACGATTCTAGCTGGGCTTGTAATGGGTCCTCAAAGACCTCATGAAGGGTTCTCTGCGAGAAATTACATAGTTGATGTGGCAAAGGGGCGGATGAGAATCAGACTGAAGGTTGGTTTGGCGCTGGGTGTGGTGGTGTTGTGTATTGGAATAGGGAGTTTGGTTTTGTGCTTTGTGGAGGGCTTGACTTGGATTGATTCAATTTACTTATCGGTCATGTCTGTAACAACAGTGGGGTATGGGGACAGAGCCTTCAAGACCCTTCCTGGGAGGCTCTTTGCTGCTATTTGGCTCCTCTTTTCCACACTGATGGTGGCCCGGGCCTTCCTGTATTTGGCGGAGGCCAGAATTGATAAAAGGCACCGGAGAATTGCCAAGTCGGTGCTGCATAGAGATATGACTGTTGAAGATTTGCTGGCTGCTACTATCAATAACACTGGCTTCATTAGCAAGTCAGAGTATGTAATATTCAAGCTCAAAGAGATGGGGAAGATAAGGGAAAAAGATATATTGCAAATCTGTGACCAGTTCCACAAACTTGATTCCACTAACTCCGGGAAGATAACGTTGCCTCATCTCTTGGAGGGCCGGTCATGA 1254 0.4537 MLINYSQVSALRRKYPISSTHTIPQIFLCWFFFPHMEDESFLSWQTRTQFEPITENRVPDLSFSSSHSFNEFISLQEARIDPQSSSQLLTQDAPKKKLTRCKTAPAMVVLQDLRQKSPDVVKPQSSSIIRQGICLLMMYLSVGVVIYSFNRDHFSGAETHPVVDALYFCIVTMCTIGYGDITPTSPVTKVFACIFVLVGFGFIDILLSGLVNYVLDLQENTILAGLVMGPQRPHEGFSARNYIVDVAKGRMRIRLKVGLALGVVVLCIGIGSLVLCFVEGLTWIDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKSVLHRDMTVEDLLAATINNTGFISKSEYVIFKLKEMGKIREKDILQICDQFHKLDSTNSGKITLPHLLEGRS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0383 417 FunFam Two-pore potassium channel 3 240 354 - -
Alju01g0383 417 PRINTS Two pore domain K+ channel signature 295 304 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju01g0383 417 PRINTS Two pore domain K+ channel signature 171 199 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju01g0383 417 Gene3D - 240 360 - -
Alju01g0383 417 Gene3D - 106 222 - -
Alju01g0383 417 Pfam Ion channel 136 214 IPR013099 -
Alju01g0383 417 Pfam Ion channel 264 333 IPR013099 -
Alju01g0383 417 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 162 391 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju01g0383 417 SUPERFAMILY Voltage-gated potassium channels 122 214 - -
Alju01g0383 417 SUPERFAMILY Voltage-gated potassium channels 248 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0383 Alju-ChrAlju01 2931577 2934511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0383 39 413 Ion Channels AT4G01840 59.214 8.59e-155 442