Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0380 ATGCTTGCCCTACAAGCAAATACAGCCTTTCAGGTGGAAGGTAGAAGGCAGCGATCTGATATGGGGACGGAGAATGGCGAAGCCGAAGCAAGCACATCAAATAATGAAGCAGGAACAAGCACAAATGAAGAAAACAAGAATCAAACAGAAAAGACAGAGACAGTTCCGTTTCATAAGTTGTTCACATTTGCCGACTCTACAGATATATTGTTGATGGTTATTGGCACCATCGGGGCCATTGGAAATGGTGGGGGTTTGCCTCTCATGACGTTGCTGTTCGGCGATATGATTGATTCCTTCGGAAATAACCAGAACACCGCTGAGGTGGTCGATAAAATTTCCAAGGTTTCTCTGAAGTTTGTGTACTTGGCGATCGGAATTGGAGCTGCAGCTTTTCTCCAGGTGGCTTGCTGGATGGTCACAGGGGAGAGACAGGCCGCGAGGATAAGGAGTTTGTATTTGAAAACAATACTAAGACAAGATGTGGCTTTCTTTGATAAGGAAACAAACACCGGAGAGGTGGTGAGTAGAATGTCAGGAGACACTGTTCTTATACAAGACGCTATGGGCGAAAAGGTCGGAAAATTTCTGCAGTTAACGTCAACATTCTTTGCCGGTTTTATAATAGCATTTGTGAAAGGTTGGCTTCTCACTCTGGTCATGTTATCCACTCTTCCACTTATGGTGGTGTGTGGAGCGGCCATGGCCCTCATTATAGGCAGGATGGCATCCCAAGGCCAAAATGCTTATGGAAAAGCTGCAAACATCGTTGAACAGACAATTGGCGCAATCAGAACGGTGGCATCCTTCACGGGAGAGAAGCATTCAGTATCTAGTTACAGCAGGTTCCTAGTAGATGCATACAAATCAGGAGTTCGTGAAGGTTTGGTAGCTGGATTGGGTATTGGGACATTTATGTTCGTAATTTTCTGTGGCTATGCTTTGGCCACATGGTATGGTGGAAAGTTGATACTGGATAATAAAGGAGGATATAACGGGGGTACAGTGATTACTGTGGTCTTTGCCGTCTTAACTGCTTCCATGAATGTTGGTCAAACAGCCCCTTGTCTGAGTGCTTTTGCGGCAGGCCAAGCGGCAGCTTATAAAATGTTCAAGACTATTGAGAGAAAACCAGAGATAGATTCTTATGATGAAAAAGGGAAAGTAGTACAAGACATTCAGGGTGAAATAGAGTTGAGGGACGTTTATTTCAGTTACCCTGCTAGACCTGGGGAGCTGATTTTTGATGGCTTCTCTCTTAAAATCCCAAGTGGCACTACTGCAGCTTTGGTTGGACAAAGTGGAAGTGGGAAATCCACTGTCATCAGTTTAATAGAAAGATTTTATGATCCACGGGCAGGTGAAGTTCTCATAGATGGCATTAACTTGAAAGAATTCCAACTCAGATGGATTAGAGGAAAAATTGGGCTTGTCAGCCAAGAGCCTGTCCTTTTTGCATCCAGCATTAAGGATAACATTGCATATGGAAAAGAAGGAGCAACAACTGAAGAGATAAAAGCTGCAGGTGAACTTGCAAATGCAGCTAAATTCATTGATAAATTACCACAGGGATTGGACACTATGGTTGGAGACCATGGAACTCAGTTGTCTGGGGGACAGAAGCAGCGCATTGCCATTGCAAGAGCAATTCTCAAAAATCCGAAAATCCTACTTCTAGATGAAGCTACGAGTGCACTTGATGCAGAGTCTGAAAGGATTGTGCAAGAGGCCCTAGACAGGATCATGGTAGACAGAACTACTGTTGTTGTGGCACATCGCCTGAGCACAGTGAAAAATGCCGATATGATTGCTGTGATTCACAGAGGAAAGATGGTCGAGAAAGGAACACACACAGAATTGCTCAAGGATCCTGAAGGAGCATACTCTCAGCTTATACGCCTACAAGAAGTAAATAAGGAGTCAGAAGATAGTGCAGATCATGAAAACAAGCGTGAACATTCCTCAGAGTCCTCAAGGCGTTCTAATAGTCAGATAAGGTCATTAGGAAGATCCATAAGTCGAGGATCATCGGCGGGAAATAGCAGCCGCCACTCATTTTCAGTTGCGTTTGGCTTGCCTACTACTACAGTCGTCGACAACACTGATCCCAAAACTGAACTTGAAAGTCCAGAAACTAAAGAACAGGCACCAAAGGTTCCACTCCGCCGCCTTGCTTACCTCAACAAGCCAGAGATCCCAGTGCTTCTGCTTGGATCTTTAGCTGCCATAGTGAATGGTGCCGTACTTCCTTTATTTGGCATTTTGATCTCCAGTGCAATCAAATCGTTCTACGAGCCACCTGAAGAAATGAAAAAGGATACTAGGTTCTGGGCATTAATGTTTCTGGTACTTGGTATTGCTTCTTTGTTGGCACTTCCTGCTAGAGGATATCTTTTTGCTGTTGCCGGTTGTAAGTTAATCCAACGCATCAGGCAAATGTGCTTTGAGAAAGTAGTAAACATGGAGATAAGCTGGTTTGATGATCCTGAGCATTCAAGTGGTGTAATTGGAGCAAGACTCTCAGGAGACGCAGCAACTGTGCGTGCACTTGTTGGGGATGCTCTGGGACAACTGGTCGAGAATCTCTCTTCATTACTGGCTGGTTTGATAATTGCTTTCATTGCAAGCTGGCAGTTAGCTTTGATTATTCTTGTTTTGATTCCCTTGATCGGAGTAAACGGATATGTTCAAGTGAAATTCATGAAAGGGTTCAGCGCTGATGCAAAGATGATGTACGAGGAAGCAAGTCAAGTTGCTACTGATGCAGTGGGAAGTATAAGAACAGTGGCTTCTTTTTGTGCTGAAGAGAAGGTGATGGAACTATATAGTAAGAAATGTGAAGGGCCAATGAAATCTGGGATTCATCAGGGTTTGATCAGTGGAACAGGATTTGGGTTATCGTTTTTCTTACTCTTCTGCGTCTATGCAACCAGTTTTTATGCGGGAGCTAAACTTGTGAAGGACGACAAAGCTACATTCCCAGATGTTTTCCGGGTTTTCTTTGCTTTAACTATGGCGGCTTTAGCAATTTCCCAATCAAGCTCTTTTGCTCCTGATTCTAGCAAAGCCAAGGTAGCTGCTGCTTCTATATTTGGAATGATTGACAGGAAATCGATGATAGATCCAAGCGACGAGTCAGGAACAACATTGGATAGCGTAAAAGGAGAAATTGAGCTTCGTCATGTTAGCTTTAAGTATCCATCCAGGCCAGACGTACAGATTTTCAGAGACCTTAGCTTGGCCATACATTCCGGCAAGACCGTGGCCCTTGTAGGTGAAAGTGGAAGTGGAAAATCTACTGTGATTTCATTGTTGCAGAGATTTTACGATCCTGATTCAGGTTCAATCACACTTGATGGGATAGAGATTCAAAAGCTCCAGCTTAAATGGTTAAGGCAACAAATGGGTCTTGTGAGCCAAGAGCCAATATTGTTCAACGACACTATTCGTGCCAATATTGCCTATGGAAAGGGAGGCAATGCAACAGAAGGAGAAATCATAGCTGCAACCGAACTGGCCAATGCTCATAAGTTCATCAGTGGTTTACAACAAGGGTATGATACGGTAGTGGGAGAAAGGGGGATTCAATTATCAGGTGGGCAAAAGCAGAGAGTGGCAATAGCACGTGCTATGATTAAAAGTCCAAAGATTTTGTTATTAGATGAAGCAACAAGTGCGCTGGACGCAGAGTCAGAGAGGGTAGTTCAAGATGCATTGGACAAAGTGATGGTGAATAGAACAACAGTGGTTGTGGCACATCGTTTATCTACAATAAAGAATGCAGATGTTATAGCAGTGGTTAAGAACGGAGTCATAGTTGAGAAAGGAAGACATGAGACTTTGATTAAAATCAAGGATGGATTGTATGCTTCTTTAGTCCAACTTCATGCGAGCGCTTCTACATCATGA 3909 0.4362 MLALQANTAFQVEGRRQRSDMGTENGEAEASTSNNEAGTSTNEENKNQTEKTETVPFHKLFTFADSTDILLMVIGTIGAIGNGGGLPLMTLLFGDMIDSFGNNQNTAEVVDKISKVSLKFVYLAIGIGAAAFLQVACWMVTGERQAARIRSLYLKTILRQDVAFFDKETNTGEVVSRMSGDTVLIQDAMGEKVGKFLQLTSTFFAGFIIAFVKGWLLTLVMLSTLPLMVVCGAAMALIIGRMASQGQNAYGKAANIVEQTIGAIRTVASFTGEKHSVSSYSRFLVDAYKSGVREGLVAGLGIGTFMFVIFCGYALATWYGGKLILDNKGGYNGGTVITVVFAVLTASMNVGQTAPCLSAFAAGQAAAYKMFKTIERKPEIDSYDEKGKVVQDIQGEIELRDVYFSYPARPGELIFDGFSLKIPSGTTAALVGQSGSGKSTVISLIERFYDPRAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATTEEIKAAGELANAAKFIDKLPQGLDTMVGDHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALDRIMVDRTTVVVAHRLSTVKNADMIAVIHRGKMVEKGTHTELLKDPEGAYSQLIRLQEVNKESEDSADHENKREHSSESSRRSNSQIRSLGRSISRGSSAGNSSRHSFSVAFGLPTTTVVDNTDPKTELESPETKEQAPKVPLRRLAYLNKPEIPVLLLGSLAAIVNGAVLPLFGILISSAIKSFYEPPEEMKKDTRFWALMFLVLGIASLLALPARGYLFAVAGCKLIQRIRQMCFEKVVNMEISWFDDPEHSSGVIGARLSGDAATVRALVGDALGQLVENLSSLLAGLIIAFIASWQLALIILVLIPLIGVNGYVQVKFMKGFSADAKMMYEEASQVATDAVGSIRTVASFCAEEKVMELYSKKCEGPMKSGIHQGLISGTGFGLSFFLLFCVYATSFYAGAKLVKDDKATFPDVFRVFFALTMAALAISQSSSFAPDSSKAKVAAASIFGMIDRKSMIDPSDESGTTLDSVKGEIELRHVSFKYPSRPDVQIFRDLSLAIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGSITLDGIEIQKLQLKWLRQQMGLVSQEPILFNDTIRANIAYGKGGNATEGEIIAATELANAHKFISGLQQGYDTVVGERGIQLSGGQKQRVAIARAMIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLIKIKDGLYASLVQLHASASTS 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0380 1302 SUPERFAMILY ABC transporter transmembrane region 717 1041 IPR036640 GO:0005524|GO:0016020
Alju01g0380 1302 Pfam ABC transporter 416 564 IPR003439 GO:0005524
Alju01g0380 1302 ProSitePatterns ABC transporters family signature. 536 550 IPR017871 GO:0005524|GO:0016887
Alju01g0380 1302 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 736 1022 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g0380 1302 Gene3D ABC transporter type 1, transmembrane domain 118 1031 IPR036640 GO:0005524|GO:0016020
Alju01g0380 1302 FunFam ABC transporter B family member 1 387 636 - -
Alju01g0380 1302 Pfam ABC transporter transmembrane region 736 1007 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g0380 1302 Pfam ABC transporter transmembrane region 72 348 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g0380 1302 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 73 362 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g0380 1302 CDD ABC_MTABC3_MDL1_MDL2 1057 1295 - -
Alju01g0380 1302 MobiDBLite consensus disorder prediction 697 716 - -
Alju01g0380 1302 MobiDBLite consensus disorder prediction 1 52 - -
Alju01g0380 1302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1047 1295 IPR027417 -
Alju01g0380 1302 PANTHER ABC TRANSPORTER B FAMILY 36 637 IPR039421 -
Alju01g0380 1302 FunFam ABC transporter B family member 1 1047 1297 - -
Alju01g0380 1302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 387 635 IPR027417 -
Alju01g0380 1302 FunFam ABC transporter B family member 1 715 1023 - -
Alju01g0380 1302 SUPERFAMILY ABC transporter transmembrane region 58 381 IPR036640 GO:0005524|GO:0016020
Alju01g0380 1302 CDD ABC_MTABC3_MDL1_MDL2 397 635 - -
Alju01g0380 1302 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1057 1294 IPR003439 GO:0005524
Alju01g0380 1302 MobiDBLite consensus disorder prediction 660 684 - -
Alju01g0380 1302 Gene3D - 1047 1301 IPR027417 -
Alju01g0380 1302 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 397 633 IPR003439 GO:0005524
Alju01g0380 1302 MobiDBLite consensus disorder prediction 638 659 - -
Alju01g0380 1302 CDD ABC_6TM_Pgp_ABCB1_D2_like 725 1040 - -
Alju01g0380 1302 Gene3D - 395 648 IPR027417 -
Alju01g0380 1302 FunFam ABC transporter B family member 9 1024 1046 - -
Alju01g0380 1302 ProSitePatterns ABC transporters family signature. 1197 1211 IPR017871 GO:0005524|GO:0016887
Alju01g0380 1302 SMART AAA_5 1084 1277 IPR003593 GO:0016887
Alju01g0380 1302 SMART AAA_5 424 731 IPR003593 GO:0016887
Alju01g0380 1302 MobiDBLite consensus disorder prediction 638 684 - -
Alju01g0380 1302 FunFam ABC transporter B family member 9 59 393 - -
Alju01g0380 1302 CDD ABC_6TM_Pgp_ABCB1_D1_like 72 358 - -
Alju01g0380 1302 Pfam ABC transporter 1076 1225 IPR003439 GO:0005524
Alju01g0380 1302 MobiDBLite consensus disorder prediction 24 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0380 Alju-ChrAlju01 2892395 2898126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0380 55 1296 Calmodulin-binding Proteins AT2G36910 45.280 0.0 1076