Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju01g0374 | ATGGCTGCGATTAAGAGTTCTTCCCCCCCCCCCCCCCAATTTATAGGACGCCAATTTTTCTCATGGAGCAATAAAGGATCTGTCTTTATTTATAATTATAACGTGTTCCGTCGTTTCCTTGGCCGCCATTTGCTTCCCCTCCGGCATATTTGCAACAGGTGGAGCACCAGGATGGCCGGAGCTGAAGCTAAGAAGCCCACTGCAAAACAATCTGGTGGGAAGAAGAAGGTTAAGAAAGAGACAGGTTTAGGGCTTTCAAATCGAAAGGCAGACAACTTTGGGGAGTGGTACTCTGAGGTAGTTGTCAATGGGGAAATGATTGAGTACTATGACATTTCTGGATGTTACATTCTGAGGCCATGGGCAATGTCAATCTGGGAGGTGATGCAAGCCTTCTTTGATGCAGAGTTAAAGAAAATGAAAGTCAAGAACTGCTACTTCCCTTTGTTTGTGTCTCCTGGCGTTTTGCAAAAGGAGAAGGATCATGTTGAGGGCTTTGCACCAGAGGTTGCCTGGGTGACAAAGTCTGGGGAAACTGATCTGGAGATTCCTATTGCTATCCGTCCAACTAGTGAAACTGTCATGTATCCATACTACTCCAAGTGGATAAGGGGACATCGTGATTTGCCTTTGAAACTTAATCAATGGTGCAATGTGGTTAGATGGGAGTTCAGTAATCCCACACCATTCATCAGGAGCCGTGAGTTTCTTTGGCAGGAAGGGCATACTGCTTTTGCAGCAAAGGAGGAGGCAGATGCTGAGGTCCTCGAGATATTGGAGTTGTATAGGCGTATATATGAAGAATATCTAGCAATTCCTGTCATAAAGGGTAAGAAAAGTGAGCTGGAGAAGTTTGCCGGTGGACTTTACACAACTAGTGTTGAGGCATTTATTCCAAACACTGGTCGTGGCATACAAGGTGCAACTTCTCATTGTCTTGGCCAAAATTTTGCCAAAATGTTTGAGATAAATTTTGAAAATGAGAAGGGAGAGAAAGCAATGGTCTGGCAGAACTCATGGGCCTATAGCACTCGAACTATTGGGGTCTTGGTGATGGTTCATGGGGATGACAAAGGGCTTGTGCTGCCACCTAAAGTAGCATCAGTGCAAGTCATTGTGATTCCAGTGCCTTATAAAGATGCAGATACTCAAGGTATTCTTGATGCCTGCTCTGCCGCTGTGAATACTTTGTGTGAAGCAGGTATTCGTGCTGAGTCAGACTTTAGAGATAACTATTCTCCTGGTTGGAAGTATTCACACTGGGAAATGAAAGGTGTTCCCCTAAGGATTGAAATCGGGCCAAAGGATTTGGCAAATAAGCAGGTGCGTGCTGTTCGACGTGATAATATGGGAAAAATAGACATACCCATGGAAGATTTAGTCCATCAAGTCCAAGATTTGCTGCACAATATTCAACAAAACCTATTTGATATGGCCAAACAAAAACGAGATGCATGCATTCAGGTTGTACATACTTGGGATGAATTTGTGGAGGCATTGAGCCAACGGAAAATGATCTTGGCTCCTTGGTGTGATGAGGAGCCTGTGGAAGTAGATGTGAAAGCAAGGACAAAGGGTGAGATGGGAGCAGCTAAGACTCTTTGTAGTCCCTTTGATCAACCGGAACTCTCTGAAGGTACCAAGTGCTTTGCATCAGGAAAGCCGGCTACGAAGTGGACATACTGGGGCAGAAGTTACTAG | 1701 | 0.448 | MAAIKSSSPPPPQFIGRQFFSWSNKGSVFIYNYNVFRRFLGRHLLPLRHICNRWSTRMAGAEAKKPTAKQSGGKKKVKKETGLGLSNRKADNFGEWYSEVVVNGEMIEYYDISGCYILRPWAMSIWEVMQAFFDAELKKMKVKNCYFPLFVSPGVLQKEKDHVEGFAPEVAWVTKSGETDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFAAKEEADAEVLEILELYRRIYEEYLAIPVIKGKKSELEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKAMVWQNSWAYSTRTIGVLVMVHGDDKGLVLPPKVASVQVIVIPVPYKDADTQGILDACSAAVNTLCEAGIRAESDFRDNYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRAVRRDNMGKIDIPMEDLVHQVQDLLHNIQQNLFDMAKQKRDACIQVVHTWDEFVEALSQRKMILAPWCDEEPVEVDVKARTKGEMGAAKTLCSPFDQPELSEGTKCFASGKPATKWTYWGRSY | 566 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju01g0374 | 566 | SUPERFAMILY | C-terminal domain of ProRS | 488 | 566 | IPR017449 | GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Alju01g0374 | 566 | SUPERFAMILY | Class II aaRS ABD-related | 358 | 484 | - | - | |
| Alju01g0374 | 566 | ProSiteProfiles | Aminoacyl-transfer RNA synthetases class-II family profile. | 125 | 363 | IPR006195 | - | |
| Alju01g0374 | 566 | FunFam | bifunctional glutamate/proline--tRNA ligase | 364 | 484 | - | - | |
| Alju01g0374 | 566 | SUPERFAMILY | Class II aaRS and biotin synthetases | 91 | 357 | IPR045864 | - | |
| Alju01g0374 | 566 | Gene3D | Bira Bifunctional Protein; Domain 2 | 86 | 363 | IPR045864 | - | |
| Alju01g0374 | 566 | Hamap | Proline--tRNA ligase [proS]. | 86 | 566 | IPR004499 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Alju01g0374 | 566 | NCBIfam | proline--tRNA ligase | 88 | 566 | IPR004499 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Alju01g0374 | 566 | Gene3D | - | 487 | 566 | IPR017449 | GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Alju01g0374 | 566 | FunFam | Proline--tRNA ligase, cytoplasmic | 487 | 566 | - | - | |
| Alju01g0374 | 566 | Pfam | Anticodon binding domain | 370 | 466 | IPR004154 | - | |
| Alju01g0374 | 566 | Pfam | tRNA synthetase class II core domain (G, H, P, S and T) | 186 | 351 | IPR002314 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Alju01g0374 | 566 | FunFam | Bifunctional glutamate/proline--tRNA ligase | 85 | 363 | - | - | |
| Alju01g0374 | 566 | CDD | ProRS_anticodon_zinc | 359 | 566 | - | - | |
| Alju01g0374 | 566 | Pfam | Prolyl-tRNA synthetase, C-terminal | 493 | 566 | IPR016061 | GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Alju01g0374 | 566 | CDD | ProRS_core_arch_euk | 92 | 353 | IPR033721 | - | |
| Alju01g0374 | 566 | PRINTS | Prolyl-tRNA synthetase signature | 215 | 223 | IPR002316 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Alju01g0374 | 566 | PRINTS | Prolyl-tRNA synthetase signature | 144 | 162 | IPR002316 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Alju01g0374 | 566 | PRINTS | Prolyl-tRNA synthetase signature | 225 | 236 | IPR002316 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Alju01g0374 | 566 | PRINTS | Prolyl-tRNA synthetase signature | 185 | 196 | IPR002316 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Alju01g0374 | 566 | PANTHER | PROLYL-TRNA SYNTHETASE | 61 | 566 | IPR004499 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Alju01g0374 | 566 | MobiDBLite | consensus disorder prediction | 61 | 81 | - | - | |
| Alju01g0374 | 566 | Gene3D | - | 364 | 484 | IPR036621 | - | |
| Alju01g0374 | 566 | SMART | ProRS_C_1_2 | 493 | 566 | IPR016061 | GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju01g0374 | Alju-ChrAlju01 | 2863592 | 2872616 | Dispersed/Wgd |