Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0368 ATGGCAGCCTCCAGCTCCTCCTCTGTTTCTTCTTTCTTCTTCATCTTCTCTGCTTTGTTACTCTGCTTTCCCTACTTTGCATCTTTGGGAGCGGAGGCTCGTCACGATCCCTGTTCCATTTCATCTCTCATACACAAAAAGCTCTTTAAAACCTTCTTCCTCCACAAAGATGACTCTGCATGCCCTGCCAAAGACTTCTACACCTACAAGTCTTTCACTCACGCCGCCAAATCCTTCCCTGAGTTTGGCACCAGCGGAAATATAACCACGCGAAAGCGTGAGATCGCCGCATTTCTTGCTCAGATCTCCCACGAGACAACCGGTGGGTGGCCCACCGCACCTGATGGACCCTACGCCTGGGGCTTGTGCTACAAGGAAGAACTTAAGCCTCAGAGTAATTACTGCGACTCCAACAACGCTCAATGGCCTTGTTACCCTGGCAAAAGCTACTATGGCAGAGGACCCATTCAACTCTCCTGGAACTTTAACTATGGGCCAGCTGGGAAGGCATTGGGATTTGATGGGCTGAGGAATCCTGAAATCGTAGCCAACAATTCAGTGATTGCGTTTAAGACGGCTCTCTGGTTTTGGATGACGGAGCGAAAGCCGATACCTTCTCCCCACAATGTGATGGTGGGGAAATATGTTCCGACACAGGCTGATATAGCGGCTAATCGTACGGCTGGCTATGGGTTGGCCACCAACATAATCAACGGTGGATTAGAGTGTGGAATCCCTAATGACCCAAGAGTGAATGATCGCATCGGGTTCTTCCAAAGATATGCCAAGTTGCTCAACGTAGACACAGGACCTAATTTGGATTGCGCTCATCAGAAATCATTTCAAGTTCTAAGTTCCAACTAA 864 0.4884 MAASSSSSVSSFFFIFSALLLCFPYFASLGAEARHDPCSISSLIHKKLFKTFFLHKDDSACPAKDFYTYKSFTHAAKSFPEFGTSGNITTRKREIAAFLAQISHETTGGWPTAPDGPYAWGLCYKEELKPQSNYCDSNNAQWPCYPGKSYYGRGPIQLSWNFNYGPAGKALGFDGLRNPEIVANNSVIAFKTALWFWMTERKPIPSPHNVMVGKYVPTQADIAANRTAGYGLATNIINGGLECGIPNDPRVNDRIGFFQRYAKLLNVDTGPNLDCAHQKSFQVLSSN 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0368 287 Pfam Chitinase class I 43 275 IPR000726 GO:0004568|GO:0006032|GO:0016998
Alju01g0368 287 PIRSF Endochitinase 7 282 IPR016283 GO:0004568|GO:0005975
Alju01g0368 287 Gene3D - 47 281 - -
Alju01g0368 287 FunFam Endochitinase (Chitinase) 126 184 - -
Alju01g0368 287 Gene3D Endochitinase, domain 2 126 184 - -
Alju01g0368 287 ProSitePatterns Chitinases family 19 signature 2. 188 198 IPR000726 GO:0004568|GO:0006032|GO:0016998
Alju01g0368 287 CDD chitinase_GH19 46 275 - -
Alju01g0368 287 PANTHER CHITINASE-RELATED 36 279 - -
Alju01g0368 287 SUPERFAMILY Lysozyme-like 39 282 IPR023346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0368 Alju-ChrAlju01 2793727 2794690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0368 34 281 Glycoside Hydrolase AT4G01700 70.565 2.12e-138 390