Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0350 ATGGCTCCCACTCTTTTCAGTCTGATTACTTTGTTTCTAGCTTTCTCTTCCCTTTCTCTCCAGATCATTGAGGCAGAAGCTGAAGAACTCCGTAGTCTGAAGCTTAATTCTCATATCCTCCAGGAGTCTATTGTTAAACAGATCAATGGAAATCCAAAAGCAGGGTGGAAGGCTGCCATGAGTCCTCGTTTCTCAAATTATACAGTTGGTCAATTCAAGCACCTTCTAGGGGTCAAGCAAACACCTAGAAAGGAATTAAGAAATACTCCTGTAAAAACTCATCCAAAAGCATTAAAATTGCCAAATAAATTTGATGCAAGAACAGCTTGGAAGCAGTGTAGCACAATTGGAAGAATTCTAGTTACTGACTCTTCTTCTTTGATGAACACATGGAATGGTCACTGTGGTTCTTGCTGGGCATTCGGCGCTGTTGAATCATTATCAGACCGTTTCTGCATCCAATTTGGCATGAATGTATCACTCTCTGTCAATGACCTTCTCTCGTGCTGTGGATTTTTGTGTGGATCTGGCTGTGATGGAGGTTATCCCCTCAATGCTTGGCAATACCTTGTCCGCCAGGGTGTTGTTACTGAAGAGTGTGACCCATACTTCGATCAGATTGGTTGTTCTCACCCTGGTTGTGAGCCTGCATATCCAACACCTATTTGTGTAAGAAAGTGCGTCAATGGTAACCAGCTTTGGAGCCAGTCAAAGCACTACAGCGATAATGCATATAGGGTCAACTTTGATCCTTATGATATCATGACAGAAATTTTTAAGAATGGGCCGGTTGAGGTCTCTTTCACAGTTTATGAGGATTTTGCTCACTACAAATCAGGAGTATACAAACACGTCACAGGTTCCGTGATGGGAGGTCATGCTGTAAAGCTAATTGGGTGGGGAACCAGCGATGATGGAGAGGACTATTGGCTTCTCGCAAATCAGTGGAATAGAAGTTGGGGTGATGATGGTTACTTCAAGATCAGAAGAGGCACAAACGAGTGTGGTATTGAAGAAGAGGTTGTTGCGGGTATGCCTTCCTCTAAAAATCTTGTGTTGGAGGTGGCTGACGTGGACGACGATGCGGTTGTTTCATTCTGA 1101 0.4351 MAPTLFSLITLFLAFSSLSLQIIEAEAEELRSLKLNSHILQESIVKQINGNPKAGWKAAMSPRFSNYTVGQFKHLLGVKQTPRKELRNTPVKTHPKALKLPNKFDARTAWKQCSTIGRILVTDSSSLMNTWNGHCGSCWAFGAVESLSDRFCIQFGMNVSLSVNDLLSCCGFLCGSGCDGGYPLNAWQYLVRQGVVTEECDPYFDQIGCSHPGCEPAYPTPICVRKCVNGNQLWSQSKHYSDNAYRVNFDPYDIMTEIFKNGPVEVSFTVYEDFAHYKSGVYKHVTGSVMGGHAVKLIGWGTSDDGEDYWLLANQWNRSWGDDGYFKIRRGTNECGIEEEVVAGMPSSKNLVLEVADVDDDAVVSF 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0350 366 Pfam Peptidase family C1 propeptide 40 82 IPR012599 GO:0004197|GO:0050790
Alju01g0350 366 Pfam Papain family cysteine protease 132 344 IPR000668 GO:0006508|GO:0008234
Alju01g0350 366 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 291 301 IPR025660 -
Alju01g0350 366 PRINTS Papain cysteine protease (C1) family signature 293 303 IPR000668 GO:0006508|GO:0008234
Alju01g0350 366 PRINTS Papain cysteine protease (C1) family signature 132 147 IPR000668 GO:0006508|GO:0008234
Alju01g0350 366 PRINTS Papain cysteine protease (C1) family signature 309 315 IPR000668 GO:0006508|GO:0008234
Alju01g0350 366 SUPERFAMILY Cysteine proteinases 45 346 IPR038765 -
Alju01g0350 366 FunFam cathepsin B-like protease 2 33 351 - -
Alju01g0350 366 Gene3D Cysteine proteinases 31 352 - -
Alju01g0350 366 CDD Peptidase_C1A_CathepsinB 101 344 - -
Alju01g0350 366 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 50 338 IPR013128 GO:0008234
Alju01g0350 366 SMART pept_c1 100 345 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0350 Alju-ChrAlju01 2638177 2641774 Dispersed/Wgd