Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0348 ATGCTGCGACTGAAAGCATTCCGGCCGACCAGTGATAAAATCGTTAAGATCCAATTGCATCCGACGCATCCGTGGATGGTCACAGCAGATGCATCAGATCGGGTCTCTGTTTGGAACTGGGAACATCGCCAGGTGATATACGAGCTAAAAGCTGGTGGAGTTGATGAGCGGCGTTTGGTCGGTGCCAAGTTGGAGAAGCTTGCTGAGGGGGAAACAGACTCCAAAGGGAAGCCCACAGAAGCCATTCGTGGAGGGAGTGTTATGCAGGTGAATTTTTATGACGATGATGTACGCTTCTGGCAACTTTGGCACAATCGCTTTGCAGCTGCAGAGGCTCCATCTGCTGTACATCATCTTACATCATCTTTTAGCTCTCCTGCCCCATCAACTAAGGGAAGGCATTTTCTTGTCATATGTTGTTTAAACAAAGCTATATTTTTGGACTTGGTGACAATGCGTGGCCGTGATGTACCAAAGCAGGAGCTTGATAACAAATCCCTCCTATGCATGGAGTTCCTTTATCGATCTGGTGGGGGTGATGGCCCTCTTGTTGCTTTTGGTGGATCTGATGGTGTCATTAGAGTTCTCTCAATGATTACTTGGAAGCTTGTACGAAGATACACTGGAGGTCACAAAGGATCAATCTCTTGTTTGATGTCCTTCGTGGCTGCTTCTGGTGAGGGTCTTCTGGTTTCGGGTGCCAGTGATGGATTGCTTGTACTTTGGAGTGCAGACCATTTACAAGATTCACGAGAACTTGTTCCAAAACTAAGCTTAAAGGCCCATGATGGTGGGGTTGTGGGAGTTGAGATTTCTAGGGTGATTGGAGGTGCTCCTCAGCTTATTACAATTGGCGCAGACAAGACATTAGCCATATGGGACACAGTCTCCTTTAAGGAATTGCGACGTATAAAACCAGTTCCAAAATTGGCTTGCCATAGTGTGGCATCTTGGTGCCATCCTCGAGCTCCAAACCTTGATATTCTTACCTGTGTAAAGGACTCTCATATATGGGCAATTGAGCATCCTACTTATTCTGCTCTCACAAGACCGTTGTGTGAATTGACCTCAGTTATTCCTCCTCAAGCTCTTGCATCTAATAAGAAGCTCAGGGTCTATTGTATGGTTGCACATGCTTTGCAGCCACATCTTGTTGCTACTGGAACCAACATTGGTGTTATAGTATGTGAGTTTGATCCTAGATCTCTTCCAGCTGTGGCACCCCTGCCAACACCAGTAGACAGCCGAGAGCATGCTGCTGTATATGTAGTTGAAAGGGAGCTCAAACTACTAAATTTTCAGCTAAACAATTCAGCAAATCCATCTCTTGGAAATAATAGCTCCTTGTCAGAAACAGGAAGATCCAGGGGTGATTTTGTGGAACCATTACCTATTAAGCAGGGGAGGAAACAAATCAATACACCTGTTCCACATGATTCATATTCTGTTCTTTCTATGAGCAGTTCAGGAAAGTATCTAGCAATTGTTTGGCCCGATATTCCCTACTTTTCTGTCTACAAGGTCAGTGACTGGTCAATTGTTGATTCCGGCAGTGCAAGGCTTCTTGCTTGGGATACATGTCGTGACAGATTTGCCATATTGGAATCATCGTTACCTCCCAGAATTCCTATTATTCCCAAGGGAGGTTCATCAAGAAGAGCAAAGGAGGCTGCCGCAGCCGCAGCACAAGCTGCCGCCGCCGCCGCCTCTGCTGCTTCCATGGCATCTGTTCAAGTGCGTATCTTGCTAGATGATGGAACATCTAACATACTGATGAGGTCTGTTGGTGCACGCAGTGAACCGGTCATTGGTTTGCATGGAGGGGCTTTGCTTGGTGTTGCCTATCGAACATCTAGGAGAGTCAGTCCAGTTGCTGCTACAGCTATTTCAACAATTCAGTCCATGCCCTTGTCAGGTTATGGAAGCAGCGGCCTTTCTTCTTTTACTACTTTTGATGATGGATTTTCCTCAAATAGATCTCCAGCTGAGGCAGCCCCTCAAAACTTCCAGCTGTACAGTTGGGAGACTTTCCAGCCCGTGGGTGACCTGCTTCCTCAGCCAGAATGGACTTCTTGGGACCAAACTGTTGAGTATTGTGCATTTGCATATCAACATTACATAGTCATATCGTGTATGCGCCCACAATTTAGATACCTAGGAGATGTTGCAATTCCACATGCTACAAGCGCTGTTTGGCACCGAAGGCAACTATTTGTAGCCACACCAACTACTATAGAAGTTGTTTTTGTGGATGCTGGGGTTGCACAAATTGACTTAGAAACTAGGAAGATGAAGGAAGAGAAAAGAATGAAAGAAGCACAAGCAAGAGCAGTAGCTGAGCACGGAGAGTTAGCACTAATTGCCATGGATGGTCCCCGAGCTACTACTGAAGAAGGAATATCATTGAGGCCACCAATGTTACAGGTGGTGCGATTGGCTTCATTTCAGCATGCTCCTTCAGTGCCACCTTTCATATCGTTGCTGAAACAATCTCGAGTTGATAGTGATGACTCTGGGATGGCTGAAGAAAGAAAGGCCAGTGAAATAGCTGTTGGTGGTGGGGGAGTGTCTGTTGCTGTTACTCGGTTCCCACTGGAGCAGAAACGTCCTGTTGGGCCTCTGGTTGTGGTGGGCGTCAGAGATGGAGTTCTTTGGGTAATTGATAGGTACATGTGTGCACATGCTTTGTCCCTGAGTCATCCAGGTATTCGTTGCCGATGTCTTGCTGCCTACGGTGATGCTGTTAGTGCGATAAAATGGGCGAGTAGGCTTGGGAGAGAACACCATGACGATTTAGCTCAATTTTTGCTGGGAATGGGTTATGCTACTGAAGCACTTCATTTGCCTGGAATATCTAAAAGGTTGGAGTTTGATCTGGCAATGAAGAGTAATGATTTGAAGAGAGCTCTCCAGTGCCTTCTTACCATGAGTAATAGCAGGGGCATAGGACAGGATAACACTGGGCTTGGTTTGACAGACATACTTAATTTGACAGATAAAAAAGAAGATGTCGTTGAAGCTGTTCAGGGCATAGTGAAGTTTGCGAAAGAGTTCTTGGATCTTATCGATGCTGCAGATGCTACTGCACAGAGTGAAATTGCTCGTGAAGCTCTCAAAAGGTTAGCCGCAGCAGTTTCAGTCAAAGGTGCTTTACAAGGTCACGAGTTGAGGGGGTTAGCCTTACGCCTTGCAAATCATGGGGAGTTAACACGACTAAGTGGCTTGGTAAATAATTTGATAACTCTTGGCTTAGGACGGGAAGCTGCTTTTGCTGCCGCAGTTTTGGGAGACAACGCTCTAATGGAAAAGGCATGGCAGGATACTGGGATGCTGGCAGAGGCTGTGCTTCATGCTCATGCGCATGGACGCCCAACGTTGAAGAACTTGGTTCAGGCCTGGAACCAAATGCTACAGAGAGAGATGGAGCCTGCTTCGTCGCAGAAGACAGATGCTGCAGCTGCATTCTTTGCCTCTCTTGAGGACCCCAAGCTTACAAGTTTGGCAGATGCTGGGAAGAAACCCCCAATTGAAATCCTGCCTCCAGGGATGATGTCTCTTTCTGCACCGATCCCTGTTCAAAAGAAACCAGCTTCTGCTGCTCAGAATTCACAGCAGCCACCTGGCAAGCCATTGGCATTGGAAGCTCCTCCGACAGCCACCACGGCAGAGCCACCAAGTGCACCACCTCCACAGCCTTCTGAATCCACGCCTGCACCAGTTACTGATTCAGCTCCATCACAGTCCACCCCAGACTCCCAACCAGACTCAGTGGCTGCTCCATCCCAGCCGGAATCTGAGGAAACCGATGTAGATAAAAAAGAAGCTCCTGCCTCTGCATCAGCAAATGATGCTGATCAAACTGCTAGTGGCGAAACTGTTCAATCAGCGTCTACGAGCAGTCCAGCATCAACACCAACACCAACAGGTACCACACCTGCAGAGGCCCCACCCAAACCAGCGGAGGCTCAGGATACAAATGTTCAAACTCCTGTATCCATTGCTGACTTCCTCGCATGA 4017 0.474 MLRLKAFRPTSDKIVKIQLHPTHPWMVTADASDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETDSKGKPTEAIRGGSVMQVNFYDDDVRFWQLWHNRFAAAEAPSAVHHLTSSFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRSGGGDGPLVAFGGSDGVIRVLSMITWKLVRRYTGGHKGSISCLMSFVAASGEGLLVSGASDGLLVLWSADHLQDSRELVPKLSLKAHDGGVVGVEISRVIGGAPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTSVIPPQALASNKKLRVYCMVAHALQPHLVATGTNIGVIVCEFDPRSLPAVAPLPTPVDSREHAAVYVVERELKLLNFQLNNSANPSLGNNSSLSETGRSRGDFVEPLPIKQGRKQINTPVPHDSYSVLSMSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESSLPPRIPIIPKGGSSRRAKEAAAAAAQAAAAAASAASMASVQVRILLDDGTSNILMRSVGARSEPVIGLHGGALLGVAYRTSRRVSPVAATAISTIQSMPLSGYGSSGLSSFTTFDDGFSSNRSPAEAAPQNFQLYSWETFQPVGDLLPQPEWTSWDQTVEYCAFAYQHYIVISCMRPQFRYLGDVAIPHATSAVWHRRQLFVATPTTIEVVFVDAGVAQIDLETRKMKEEKRMKEAQARAVAEHGELALIAMDGPRATTEEGISLRPPMLQVVRLASFQHAPSVPPFISLLKQSRVDSDDSGMAEERKASEIAVGGGGVSVAVTRFPLEQKRPVGPLVVVGVRDGVLWVIDRYMCAHALSLSHPGIRCRCLAAYGDAVSAIKWASRLGREHHDDLAQFLLGMGYATEALHLPGISKRLEFDLAMKSNDLKRALQCLLTMSNSRGIGQDNTGLGLTDILNLTDKKEDVVEAVQGIVKFAKEFLDLIDAADATAQSEIAREALKRLAAAVSVKGALQGHELRGLALRLANHGELTRLSGLVNNLITLGLGREAAFAAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQMLQREMEPASSQKTDAAAAFFASLEDPKLTSLADAGKKPPIEILPPGMMSLSAPIPVQKKPASAAQNSQQPPGKPLALEAPPTATTAEPPSAPPPQPSESTPAPVTDSAPSQSTPDSQPDSVAAPSQPESEETDVDKKEAPASASANDADQTASGETVQSASTSSPASTPTPTGTTPAEAPPKPAEAQDTNVQTPVSIADFLA 1338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0348 1338 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 303 IPR001680 GO:0005515
Alju01g0348 1338 MobiDBLite consensus disorder prediction 1166 1338 - -
Alju01g0348 1338 Gene3D - 3 402 IPR015943 GO:0005515
Alju01g0348 1338 Gene3D - 906 1154 - -
Alju01g0348 1338 MobiDBLite consensus disorder prediction 1221 1236 - -
Alju01g0348 1338 MobiDBLite consensus disorder prediction 1237 1263 - -
Alju01g0348 1338 MobiDBLite consensus disorder prediction 1280 1309 - -
Alju01g0348 1338 PANTHER TSET COMPLEX MEMBER TSTF 1 1261 - -
Alju01g0348 1338 SUPERFAMILY WD40 repeat-like 7 511 IPR036322 GO:0005515
Alju01g0348 1338 Coils Coil 756 776 - -
Alju01g0348 1338 SMART WD40_4 155 197 IPR001680 GO:0005515
Alju01g0348 1338 SMART WD40_4 252 294 IPR001680 GO:0005515
Alju01g0348 1338 SMART WD40_4 200 243 IPR001680 GO:0005515
Alju01g0348 1338 SMART WD40_4 1 39 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0348 Alju-ChrAlju01 2606720 2631614 Dispersed/Wgd