Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0347 ATGGCCAGTCCAAACGATTCTAGTACCACTTATCCTCCTCCAGCTGCAAGTTCTTCAACAATTAACATTCAAACCATGCTCAGCCCTGCTACGAGGCCGCCGCCAAACAGGTCATCAGCTTCATCGTCCTCCGCCTCCACCACCTCCAGCACTGGACAGACGCTGCCAACTACTCAAGGCGCAGATGAAGCAATAGTTGCTTTGATGAGCGGGCTTTCAGGGTTGCAGAGATGTGGAAAGAGCTGTAGGCTGAGGTGGATCATCTACCTAAGGCCTGATTTGAAGAGAGGCACATTCTCACAGGAAGAGGAAAGCCTCATCATTGAGCTTCATGCAGTATTAGGCAACAGGCATGTTTCTCTCTATCATCTGTTTCTTTTTTTCTTTCCTGCAATTGGCTGGTGTTATCAAATTGCAGCTCAGCTGCCAGGAAGAACGGACAATGAGATAATGAAAATGTGGAATTCGTGCCTCGAGAAGAAGCTGACGCAAAGAGGGATTGACCCTCTCACCCATAAACCATTGTCGGAGAGATCAGAGGAGAGCGTGAACGAATCGGTAGGCAGAAGCATAAGAAGATGGGGTCGCATCCACCGGAGAGAAGAGCCTGAACGAATCGGTAGGCAGGAGGAGAAGAAGAATGGGGTCGAATCCATCGGCGAGGAGAGCGTGAACGAATCGGCCGGCGAGTTAGACCCACCAAGGACGATGGGAAGCAATGTGAGGGGCGAAAAATTAGAAGCGTCAAATGTCGCTTTTCTGGGTGGACGTTGGCTATTAGGGGTGATCAATAATTGA 798 0.4987 MASPNDSSTTYPPPAASSSTINIQTMLSPATRPPPNRSSASSSSASTTSSTGQTLPTTQGADEAIVALMSGLSGLQRCGKSCRLRWIIYLRPDLKRGTFSQEEESLIIELHAVLGNRHVSLYHLFLFFFPAIGWCYQIAAQLPGRTDNEIMKMWNSCLEKKLTQRGIDPLTHKPLSERSEESVNESVGRSIRRWGRIHRREEPERIGRQEEKKNGVESIGEESVNESAGELDPPRTMGSNVRGEKLEASNVAFLGGRWLLGVINN 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0347 265 ProSiteProfiles Myb-like domain profile. 91 158 IPR001005 -
Alju01g0347 265 PANTHER MYB DOMAIN PROTEIN 55 72 187 - -
Alju01g0347 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 162 IPR017930 -
Alju01g0347 265 SUPERFAMILY Homeodomain-like 76 166 IPR009057 -
Alju01g0347 265 Gene3D - 95 164 - -
Alju01g0347 265 SMART sant 95 160 IPR001005 -
Alju01g0347 265 MobiDBLite consensus disorder prediction 1 57 - -
Alju01g0347 265 Gene3D - 55 94 - -
Alju01g0347 265 MobiDBLite consensus disorder prediction 205 219 - -
Alju01g0347 265 CDD SANT 98 155 IPR001005 -
Alju01g0347 265 MobiDBLite consensus disorder prediction 205 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0347 Alju-ChrAlju01 2592016 2593757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0347 72 180 MYB Transcription Factor Family AT1G57560 65.138 6.06e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju01g0347 None None None