Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0324 ATGAGTTGGAAGAATCAGGGGAAGCGCGTGCAAGACAAGAGCGCCCATTCGCTTAGAAATCAAAATCACAAGAGATCAGAGCAGCGACTTGAGCAAGAAGAAGAAGAAGAAGAAGAAATGGCAAACGAAGGCACAACAAACTTCATCGACATCCTTCTGGCCATCATCCTCCCTCCTCTAGGGGTCTTCCTCAAGTTCGGTTGCCATTCAGAGTTCTGGATCTGCTTGGTGCTCACCTTTTTGGGCTACATCCCCGGAATTATCTATGCCGTTTATGTCATCACCAAGTGA 291 0.4742 MSWKNQGKRVQDKSAHSLRNQNHKRSEQRLEQEEEEEEEMANEGTTNFIDILLAIILPPLGVFLKFGCHSEFWICLVLTFLGYIPGIIYAVYVITK 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0324 96 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 44 96 IPR000612 GO:0016020
Alju01g0324 96 MobiDBLite consensus disorder prediction 1 42 - -
Alju01g0324 96 Coils Coil 18 43 - -
Alju01g0324 96 MobiDBLite consensus disorder prediction 9 31 - -
Alju01g0324 96 Pfam Proteolipid membrane potential modulator 48 94 IPR000612 GO:0016020
Alju01g0324 96 ProSitePatterns Uncharacterized protein family UPF0057 signature. 52 67 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0324 Alju-ChrAlju01 2453635 2455754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0324 45 96 RCI2 Gene Family AT3G05880 76.923 9.72e-27 91.3