Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0306 ATGGGCGGAGGTGGAGCGACGCCGAACGTGGAGGCACAGTACTCGTCGGCGAAGATTTCGGTGTGGTGGGACATCGAGAACTGCCATGTCCCCAAGGGCTGCGATCCGCACGCAATCGCCCAGAACATCAGCTCAGCGCTGGTTCAGATGAATTATTGTGGGCCCGTTTCCATCTCCGCCTACGGCGATACTACTGGCATCACGGCTTCTGTACAGCACGCTCTCTCCAGTACTGGAATCTCCCTCAACCATGTCCCAGCTGGTGTTAAAGACGCTAGTGACAAAAAGATTCTCGTCGATATGCTGTTTTGGGCTGTGGATAATCCTGCTCCTGCTAATTATCTATTAATTTCCGGTGATCGAGACTTCTCTAACGCACTTCATCAATTGCGGATGAGGAGATATAATATCCTTCTTGCACAGCCTCAGAAAGCATCTGCACCCTTAGTTGCAGCTGCCAAGAGTGTATGGCTTTGGACTACTCTCTTAGCTGGAGGACCTCCTCTAACAAATGGTGAATCACAACATTTTGGTAATAATAGCAACTTATCGAGTTCTGACACCTTACAAATCCCGGTCTCTAGTTCTGTTCAGACAAAGCAACAAAGTGATTCCTTTGCTGAAGTTCACGTAGGAAATCATAACCATAATCATAAATTTCCAAATGCTGGAAGGGGATTAGATTCTAGATACCAGGGTAAAACAAATTGGAGAAGCCCTAGTCAACCAAATGGACCCAAACCATTGAACCAACCAATTGGACTTCAAGAAAATCATAGCAGTATAAACTCTTACCGAGCTGGCAACCCAAATGTTCCCCCAAATGGATCCGCTCCAAATTTTGTGCATGGCAGTCCTGGTCAATTATGGAGCAATAGCAGCAATCTACCAGGCAATAGCCAAATGCCTTATTCACAGCCATTAAGACCCAACAATTATCCAATGCAACCTGCTTTTGCAAAAAACAAACAATATCCACCAAATACACATTCTTTTGCAACTCCAGTAGTGCCTCCTAGAACTGGTGGACTCAACTTCACCTCAGGACCACTTACAAATGTGCCAGATATAGGTAATCTGAACATATCTGCATTGCCAAAACAGAATCCTATCAATAATGCTCTACATCCTGTAAGGTCAGTTGACGAACAAAATGGACATACTGTACAGAACAATCAACCATTATACCGTGCCCACTCTTATGGTCCAGATCATCTACCTCCATCTATGGCAGCAATGGGTAGTAATAACCCTCCTGGTAATGGCATGTGGGGATCTTCAGGATGTCCTAAACCTTCTGAATATGTACAAGGGCTTATTGGGGTTGTTTTGCTTGCCTTGAACACATTAAAAAATGAAAAGATAATGCCAACTGAGGCAAATATAACTGATTGCATCCATTATGGAGATCCTAAACACCGCAGCACTGATGTTAAGAAGGCTTTGGAGAGTGCTATTGAACAACAGATGGTGGTGAAACAGAATTTAGGTGCTTTGCAGTTGTATATTGGTAAGAATGATAGACTTTGGAAGTGTGTAAATCCTATAGGTGGTAATCCCAATCAACACTCGAAAGAAACATGGGATGAAATCCAAAAATTTTTAACCACTCATTCTGGAAGACTTGCAATAATGGGTACTCAATGCAAATACGAAGCAGGTACTGTGATAAAGAATATGTGCTTAAAAGATGTTGCTTTGGGAGATGTTCTTCAGATTTTGAACATGGTGATTGCTAATAAAAAATGGATCATGCATCGTCAGTCAGGATGGCAACCACTTACCATTACTCTACCTCAGGCGAACTCTGATTTAGGTGTCACATCCTGA 1830 0.4322 MGGGGATPNVEAQYSSAKISVWWDIENCHVPKGCDPHAIAQNISSALVQMNYCGPVSISAYGDTTGITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTTLLAGGPPLTNGESQHFGNNSNLSSSDTLQIPVSSSVQTKQQSDSFAEVHVGNHNHNHKFPNAGRGLDSRYQGKTNWRSPSQPNGPKPLNQPIGLQENHSSINSYRAGNPNVPPNGSAPNFVHGSPGQLWSNSSNLPGNSQMPYSQPLRPNNYPMQPAFAKNKQYPPNTHSFATPVVPPRTGGLNFTSGPLTNVPDIGNLNISALPKQNPINNALHPVRSVDEQNGHTVQNNQPLYRAHSYGPDHLPPSMAAMGSNNPPGNGMWGSSGCPKPSEYVQGLIGVVLLALNTLKNEKIMPTEANITDCIHYGDPKHRSTDVKKALESAIEQQMVVKQNLGALQLYIGKNDRLWKCVNPIGGNPNQHSKETWDEIQKFLTTHSGRLAIMGTQCKYEAGTVIKNMCLKDVALGDVLQILNMVIANKKWIMHRQSGWQPLTITLPQANSDLGVTS 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0306 609 MobiDBLite consensus disorder prediction 232 279 - -
Alju01g0306 609 Gene3D - 10 161 - -
Alju01g0306 609 Pfam NYN domain 18 154 IPR021139 GO:0004540
Alju01g0306 609 CDD PIN_limkain_b1_N_like 18 142 - -
Alju01g0306 609 MobiDBLite consensus disorder prediction 212 279 - -
Alju01g0306 609 Pfam OST-HTH Associated domain 548 603 IPR025677 -
Alju01g0306 609 PANTHER LIMKAIN B LKAP 15 493 IPR024768 GO:0005777|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0306 Alju-ChrAlju01 2349317 2351973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0306 11 201 C2H2 Transcription Factor Family AT5G61190 69.948 2.83e-83 280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0306 01 2349317 2351973 Alju01g0306 01 2349317 2351973 ECH