Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0301 ATGGGGACTGAAAATCCTGGACGTTCAAGTTTTCCTGCTAGGCCTGCCACAACACCTTTTGCTCCTCCACAGACTATGACACCGTTTTCATCAACTGGTCCTGTGGTTGGATCTGAGCCTCCTTTCCCCCGTCCTCCTCCTCCTGCTGCTTCCCAGCCTTCAGTGCCATTGTCATCATCCGGACATACTGTCACACCAGGGGCATTCGATTTCAGGCCTATCCCTCCTGGTAGGTTTAATGATCCATCTGTGCCTTCGCCTCCAACGTACAATGTCCCACCTGCCGGTGGACATTTCCAGCGTTTTCCAACTCCACAGTTTACCTCAACAGCCCAAACTCCTCCACTTGTTCCACCCATAGGACAACCATCAATCCCGCCTTCTGTGAATCAAGCACCGCCTTTTCCTGCATCCCTTCAACCACAGACACCAATTGTTCCAATGGGCTCTCCCCCACAAAGTGCTCCTCCTGCACCTTTGAAGTCTAATGTTCCTCCTTTGTCAGATTCATCATTTCCAGGGTCTAGGCCTAATTTTCAGCCATCTTTTCCTGGATATGTCCGCAAGCAGACTGGTACTGAAATGCAAGGTCCGCCTGTGCCTCCATCTTTTCCCGCTACTCAAGGTAATTATGCGCCTGCCTCACCTGCTCTATCTCATCAAGGGAGCTATGTTCCACCGCCTCCAGTGGCTGCTCAATTGGGCATGCAGCAGATGCAACAGCCGGGATATGGACCTTCTGTTGGTGCCATTCATGGCCTGGCAGAAGACTTCAGTTCACTCTCTATTCAAACTCGCCCTGGTTCAATGGAAAAAGCAGTTGATGCTAAAGAACTTCCAAGGCCACTGGATGGTGATGTGGAGCCAACATCTCTGGCTGACCTTTTTCCCATGAACTGCAACCCCAGATATCTACGGTTGACAACCAGTGCAATTCCCAGCTCTCAGTCCTTAGCTTCAAGATGGCATCTACCTCTTGGAGCAGCTGTTTGCCCACTTGCAGAAGCTCCTGATGGGGAAGAGGTGCCTATAATCAATTTTGCCCCAACTAGTGTCATACGGTGTAGGAGATGTCGCACTTATGTGAATCCATATGTGACTTTCACAGATGCTGGAAGAAAATTTCGGTGCAATGTTTGCACTTTGCTGAATGACGTGCCTAGTGAATATTTTGCTCACTTAGATGCCACTGGTAGAAGAGTTGATTTGGATCAAAGACCTGAGCTTACAAAGGGTACTGTGGAATTTGTTGCCCCTGCTGAATATATGGTGCGACCTCCTATGCCCCCAGTGTATTTCTTCCTCATTGATGTTTCCATATCTGCGGTTAGAAGTGGAATGATTGAGGTTGTGGCCCAAACAATCAAGACATGTCTAGATGAGTTGCCTGGCTCTCCACGAACCCAAATAGGTTTTGCGACTTTTGACGGCACAATTCATTTTTATAATATGAAGTCTTCCTTGACTCAGCCACAGATGTTGGTAGTCTCAGATCTGGATGACATATTTGTTCCACTTCCAGATGATCTCCTTGTTAATTTATCTGAATCCAGAAGTGTGGTGGAGACCTTCCTTGATAGTTTACCATCCATGTTCCAGAACAATGCAAACATTGAATCAGCTTTTGGTCCGGCTCTTAAGGCTGCGTTCATGGTTATGAGTCAACTTGGAGGGAAATTGTTAATTTTCCAAAACACACTGCCATCTCTTGGAGTTGGGCGCTTAAAATTACGTGGAGATGATGCTCATGTTTATGGGACTGATAAAGAACACATGTTAAGGTTGCCAGAAGATCCATTTTACAAGCAGATGGCTGCTGAGTTTTCTAAATACCAGATCTGTGCTAATGTGTATGCATTTAGTGACAAGTACACTGACATTGCATCCTTAGGAACTTTGGCAAAGTATACTGCCGGTCAAGTATATTACTATCCAGCTTTCCAATCAACTATTCATGGGGAGAAGTTGAGGCATGAGTTGAGGAGAGACCTAACCAGAGAAACTGCATGGGAAGCTGTACTGCGCATTAGATGTGGAAAAGGTGTCCGCTTCACAACTTTTCACGGGAACTTCATGCTAAGATCTACCGATTTGTTAGCACTTCCAGCTGTAGATTGTGATAAAGCTTTTGCTATGCAGTTATCTCTTGAAGAGACATTGCTGACAACTCAGACTATGTATTTCCAAGCTGCATTGCTATATACTGCATCTTGTGGCGAAAGACGTATCAGAATACACACTGCTGCAGCTCCAGTAGTTACAGACTTGGGAGAGATGTATCGCCTGGCTGATACTGGTGCCATAGTTTCTGTACTTAGTCGGCTAGTAATTGAGAAAACATTGTCTAGCAAACTGGAAGATGCAAGGAGTGCTGTACAGCTAAGAATTGTCAAGGCCCTCAGAGAATATCGAAATCTATATGCTGTGCAACATCGCTTGGCTAACAGGATGATATATCCTGAGTCTCTAAAATTCCTACCATTGTATGGCTTGGCACTTTGTAAATCAATACCTCTCCGTGGAGGGCATGCTGATACTCTGCTGGATGAACGGTGTGCAGCAGGATACACAATGATGGCTCTACCGATAAAAAGGCTGTTGAAATTTCTATATCCAAGCTTAGTTCGACTCGATGAATATCTATTGAAGTCTGATGAATTAAAAAACATTGAGAAAAGGTTACCATTGACTGGTGAGAGCTTGGATTCTAGAGGCCTTTATGTATATGATGATGGCTTCCGGTTCCTTATATGGTTCGGTAGAGTGCTTTTACCTGATATAGCTATGAATTTGCTTGGGGCAGACTTCGCTGCAGAATTATCGAAGGTTACTCTTAAGGAGCATGATAATGAGATGTCAAGGAAGCTATTCAGGATACTTGAGAAACTGAGAAATACTGATCATTCGTATTATCAGTTGTGCTATCTTGTGAGGCAAGGCGAACAGCCCAGAGAAGGATTCCTTATCCTTGCAAATCTTGTTGAGGACCAGATGGGTGGTGCAGCAATAATAATTGAAAGAGCAGGGTCTTTGTCAGCGTCTGCTGTCTAA 3051 0.4517 MGTENPGRSSFPARPATTPFAPPQTMTPFSSTGPVVGSEPPFPRPPPPAASQPSVPLSSSGHTVTPGAFDFRPIPPGRFNDPSVPSPPTYNVPPAGGHFQRFPTPQFTSTAQTPPLVPPIGQPSIPPSVNQAPPFPASLQPQTPIVPMGSPPQSAPPAPLKSNVPPLSDSSFPGSRPNFQPSFPGYVRKQTGTEMQGPPVPPSFPATQGNYAPASPALSHQGSYVPPPPVAAQLGMQQMQQPGYGPSVGAIHGLAEDFSSLSIQTRPGSMEKAVDAKELPRPLDGDVEPTSLADLFPMNCNPRYLRLTTSAIPSSQSLASRWHLPLGAAVCPLAEAPDGEEVPIINFAPTSVIRCRRCRTYVNPYVTFTDAGRKFRCNVCTLLNDVPSEYFAHLDATGRRVDLDQRPELTKGTVEFVAPAEYMVRPPMPPVYFFLIDVSISAVRSGMIEVVAQTIKTCLDELPGSPRTQIGFATFDGTIHFYNMKSSLTQPQMLVVSDLDDIFVPLPDDLLVNLSESRSVVETFLDSLPSMFQNNANIESAFGPALKAAFMVMSQLGGKLLIFQNTLPSLGVGRLKLRGDDAHVYGTDKEHMLRLPEDPFYKQMAAEFSKYQICANVYAFSDKYTDIASLGTLAKYTAGQVYYYPAFQSTIHGEKLRHELRRDLTRETAWEAVLRIRCGKGVRFTTFHGNFMLRSTDLLALPAVDCDKAFAMQLSLEETLLTTQTMYFQAALLYTASCGERRIRIHTAAAPVVTDLGEMYRLADTGAIVSVLSRLVIEKTLSSKLEDARSAVQLRIVKALREYRNLYAVQHRLANRMIYPESLKFLPLYGLALCKSIPLRGGHADTLLDERCAAGYTMMALPIKRLLKFLYPSLVRLDEYLLKSDELKNIEKRLPLTGESLDSRGLYVYDDGFRFLIWFGRVLLPDIAMNLLGADFAAELSKVTLKEHDNEMSRKLFRILEKLRNTDHSYYQLCYLVRQGEQPREGFLILANLVEDQMGGAAIIIERAGSLSASAV 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0301 1016 MobiDBLite consensus disorder prediction 164 189 - -
Alju01g0301 1016 MobiDBLite consensus disorder prediction 1 229 - -
Alju01g0301 1016 SUPERFAMILY beta-sandwich domain of Sec23/24 195 762 - -
Alju01g0301 1016 SUPERFAMILY Helical domain of Sec23/24 764 871 IPR036175 GO:0006886|GO:0006888|GO:0030127
Alju01g0301 1016 MobiDBLite consensus disorder prediction 116 163 - -
Alju01g0301 1016 CDD Sec24-like 427 668 IPR041742 GO:0006886|GO:0006888|GO:0030127
Alju01g0301 1016 Gene3D - 300 752 - -
Alju01g0301 1016 Gene3D Sec23/Sec24 helical domain 753 998 - -
Alju01g0301 1016 PRINTS Proline rich extensin signature 64 76 - -
Alju01g0301 1016 PRINTS Proline rich extensin signature 22 34 - -
Alju01g0301 1016 PRINTS Proline rich extensin signature 40 56 - -
Alju01g0301 1016 PRINTS Proline rich extensin signature 76 97 - -
Alju01g0301 1016 PRINTS Proline rich extensin signature 103 119 - -
Alju01g0301 1016 PRINTS Proline rich extensin signature 152 177 - -
Alju01g0301 1016 MobiDBLite consensus disorder prediction 78 92 - -
Alju01g0301 1016 Gene3D Severin 872 996 IPR029006 -
Alju01g0301 1016 Pfam Sec23/Sec24 helical domain 764 867 IPR006900 GO:0006886|GO:0006888|GO:0030127
Alju01g0301 1016 Pfam Sec23/Sec24 trunk domain 427 663 IPR006896 GO:0006886|GO:0006888|GO:0030127
Alju01g0301 1016 Pfam Sec23/Sec24 zinc finger 353 390 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Alju01g0301 1016 Pfam Sec23/Sec24 beta-sandwich domain 669 752 IPR012990 -
Alju01g0301 1016 Gene3D von Willebrand factor, type A domain 429 666 IPR036465 -
Alju01g0301 1016 PANTHER SEC24-RELATED PROTEIN 131 1001 - -
Alju01g0301 1016 MobiDBLite consensus disorder prediction 38 53 - -
Alju01g0301 1016 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 880 1000 IPR036180 -
Alju01g0301 1016 FunFam protein transport protein Sec24D isoform X1 429 666 - -
Alju01g0301 1016 SUPERFAMILY vWA-like 427 666 IPR036465 -
Alju01g0301 1016 SUPERFAMILY Zn-finger domain of Sec23/24 344 426 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Alju01g0301 1016 Gene3D - 299 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0301 Alju-ChrAlju01 2294814 2303116 Dispersed