Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0295 ATGGCGAGTGGGCTAATTCCATTTCTGGCGATGGCCTTTGTGCAGTTGGGGTACGCAGGCATGAATATAATTTCAAAGCTTGCAATGCAATCTGGCATGAACCCTATCGTCCTCGCCGCTTATCGCCAAATCTTCGCCACACTTGCCATCGCTCCCTTTGCTTTCTGCTTCGAACGCAAAACGGTCCCCAAGTTGACCAAGCCTATTATGTTCCAGATATTGCTTTCTTCCTTAACTGGAGTAACAGGAAACCAAGTATTTTTCTTCCTGGGGCTGAAATATTCAGCCGCTACAATTGCATGCGCAATGACAAATTTGCTCCCAGCTTTTACCTTTATCCTTGCGCTCATCTTCAGACAAGAGTACCTGAGAATAAGGGCGTGGAGTGGGCAAGCAAAGATAGTAGGGACGGTATTGTGTGTAGGTGGAGCCTTGGTATTGTCATTCTACCATGGAAATGTCATTGAAATAGGTGAATCAATTATTCACTGGGGATATGCAGAGAGAATGCAAGAAACAAGTTCCTCTGGCAAAGCCAATTCGTTTCTTGGCCCTTTCTTCTTAATTGTTAGTGCTCTTGTGTGGGCAGTGTGGTTCGTCGTCCAGGCGGACATGGCAAAACATTTTCCAGCTCCGTATACGAGCACAGCCTACATGTGCTTCTTGGCAAGCTTCCAGTGTGTGGTCATTGCTCTGTGTTTTGATCACAGCGCCTCAGCTTGGTCCCTCGCAAATCCTATCCGAGTCATTTCTGCTCTTTATTCGGGAGTTCTTTGCACAGGAGTGGCGTGTGCGCTCATGTCGTGGATTATTGAGAGTAAAGGTCCTCTTTATGTGTCTGTGTTCACCCCATTGCAGCTCGTCATCACTGCCTTTATCAGCTGGGCTCTGCTTCGCGAGGAAATATACGTCGGCACTGTTATAGGGTCGCTGCTCATAGTTTTGGGACTCTACTCTGTCTTGTGGGGGAAGAACAAGGAGATTGCCAAGAAAGACCAGAATGAAGAAGATATAGAAGCGGCGGAGAAGAAGGCAAAAGAGGTGAAGGATAGCGAACTGGGATTGCATTCCTTGATGGTGTCTTCAAAATTGAATGATGAGTTTGCTGCTAGAGCTCCTTCTCGCCTTCACAGGCTCTGCTCTCATTGTATTCGGATCTGCACTCAAATCAGCGATCGTCTTATCTTTCTACATCTGAAAGAAGAGATGGGACTGTCTTTCGGTAAGCTATTTAGCCGGCTCTTTGCCAAGAAAGAGATGCGTATTCTGATGGTAGGACTCGATGCTGCTGGTAAGACTACCATCTTATACAAGCTCAAGCTGGGAGAGATCGTGACCACCATTCCTACCATTGGGTTTAATGTAGAGACTGTAGAATACAAAAATATTAGCTTCACCGTTTGGGATGTGGGTGGCCAGGACAAGATTCGTCCTTTATGGAGACACTATTTCCAAAATACACAAGGGCTTATCTTTGTTGTTGATAGCAATGATCGTGATCGTGTTGTTGAGGCCAGAGATGAACTTCACCGGATGTTGAATGAGGACGAGTTGAGAGATGCAGTACTTCTTGTATTTGCCAACAAGCAAGATCTACCAAATGCTATGAATGCTGCCGAAATCACAGACAAGCTTGGCCTTCATTCTCTCCGTCAGCGCCACTGGTACATCCAAAGCACGTGTGCCACTTCTGGTGAAGGACTCTATGAGGGACTGGACTGGCTCTCAAACAATATAGCCAACAAGGCTTAA 1752 0.4635 MASGLIPFLAMAFVQLGYAGMNIISKLAMQSGMNPIVLAAYRQIFATLAIAPFAFCFERKTVPKLTKPIMFQILLSSLTGVTGNQVFFFLGLKYSAATIACAMTNLLPAFTFILALIFRQEYLRIRAWSGQAKIVGTVLCVGGALVLSFYHGNVIEIGESIIHWGYAERMQETSSSGKANSFLGPFFLIVSALVWAVWFVVQADMAKHFPAPYTSTAYMCFLASFQCVVIALCFDHSASAWSLANPIRVISALYSGVLCTGVACALMSWIIESKGPLYVSVFTPLQLVITAFISWALLREEIYVGTVIGSLLIVLGLYSVLWGKNKEIAKKDQNEEDIEAAEKKAKEVKDSELGLHSLMVSSKLNDEFAARAPSRLHRLCSHCIRICTQISDRLIFLHLKEEMGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0295 583 SMART arf_sub_2 403 583 - -
Alju01g0295 583 PANTHER WAT1-RELATED PROTEIN 7 332 IPR030184 GO:0016020|GO:0022857
Alju01g0295 583 NCBIfam small GTP-binding protein domain 418 552 IPR005225 GO:0005525
Alju01g0295 583 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020
Alju01g0295 583 Pfam EamA-like transporter family 11 147 IPR000620 GO:0016020
Alju01g0295 583 Pfam ADP-ribosylation factor family 409 579 IPR006689 GO:0003924|GO:0005525
Alju01g0295 583 PRINTS GTP-binding SAR1 protein signature 449 473 IPR006689 GO:0003924|GO:0005525
Alju01g0295 583 PRINTS GTP-binding SAR1 protein signature 476 501 IPR006689 GO:0003924|GO:0005525
Alju01g0295 583 PRINTS GTP-binding SAR1 protein signature 521 542 IPR006689 GO:0003924|GO:0005525
Alju01g0295 583 PRINTS GTP-binding SAR1 protein signature 421 444 IPR006689 GO:0003924|GO:0005525
Alju01g0295 583 SMART rab_sub_5 420 582 - -
Alju01g0295 583 ProSiteProfiles small GTPase Arf family profile. 413 579 - -
Alju01g0295 583 Gene3D - 408 583 IPR027417 -
Alju01g0295 583 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 325 - -
Alju01g0295 583 SMART sar_sub_1 403 579 IPR006689 GO:0003924|GO:0005525
Alju01g0295 583 CDD Arf1_5_like 420 578 IPR045872 GO:0003924
Alju01g0295 583 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 141 - -
Alju01g0295 583 Coils Coil 324 351 - -
Alju01g0295 583 FunFam ADP-ribosylation factor 1 403 583 - -
Alju01g0295 583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 416 581 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0295 Alju-ChrAlju01 2264232 2270863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0295 3 340 Nodulin-like Gene Family AT1G09380 56.215 5.59e-140 409