LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju01g0295	ATGGCGAGTGGGCTAATTCCATTTCTGGCGATGGCCTTTGTGCAGTTGGGGTACGCAGGCATGAATATAATTTCAAAGCTTGCAATGCAATCTGGCATGAACCCTATCGTCCTCGCCGCTTATCGCCAAATCTTCGCCACACTTGCCATCGCTCCCTTTGCTTTCTGCTTCGAACGCAAAACGGTCCCCAAGTTGACCAAGCCTATTATGTTCCAGATATTGCTTTCTTCCTTAACTGGAGTAACAGGAAACCAAGTATTTTTCTTCCTGGGGCTGAAATATTCAGCCGCTACAATTGCATGCGCAATGACAAATTTGCTCCCAGCTTTTACCTTTATCCTTGCGCTCATCTTCAGACAAGAGTACCTGAGAATAAGGGCGTGGAGTGGGCAAGCAAAGATAGTAGGGACGGTATTGTGTGTAGGTGGAGCCTTGGTATTGTCATTCTACCATGGAAATGTCATTGAAATAGGTGAATCAATTATTCACTGGGGATATGCAGAGAGAATGCAAGAAACAAGTTCCTCTGGCAAAGCCAATTCGTTTCTTGGCCCTTTCTTCTTAATTGTTAGTGCTCTTGTGTGGGCAGTGTGGTTCGTCGTCCAGGCGGACATGGCAAAACATTTTCCAGCTCCGTATACGAGCACAGCCTACATGTGCTTCTTGGCAAGCTTCCAGTGTGTGGTCATTGCTCTGTGTTTTGATCACAGCGCCTCAGCTTGGTCCCTCGCAAATCCTATCCGAGTCATTTCTGCTCTTTATTCGGGAGTTCTTTGCACAGGAGTGGCGTGTGCGCTCATGTCGTGGATTATTGAGAGTAAAGGTCCTCTTTATGTGTCTGTGTTCACCCCATTGCAGCTCGTCATCACTGCCTTTATCAGCTGGGCTCTGCTTCGCGAGGAAATATACGTCGGCACTGTTATAGGGTCGCTGCTCATAGTTTTGGGACTCTACTCTGTCTTGTGGGGGAAGAACAAGGAGATTGCCAAGAAAGACCAGAATGAAGAAGATATAGAAGCGGCGGAGAAGAAGGCAAAAGAGGTGAAGGATAGCGAACTGGGATTGCATTCCTTGATGGTGTCTTCAAAATTGAATGATGAGTTTGCTGCTAGAGCTCCTTCTCGCCTTCACAGGCTCTGCTCTCATTGTATTCGGATCTGCACTCAAATCAGCGATCGTCTTATCTTTCTACATCTGAAAGAAGAGATGGGACTGTCTTTCGGTAAGCTATTTAGCCGGCTCTTTGCCAAGAAAGAGATGCGTATTCTGATGGTAGGACTCGATGCTGCTGGTAAGACTACCATCTTATACAAGCTCAAGCTGGGAGAGATCGTGACCACCATTCCTACCATTGGGTTTAATGTAGAGACTGTAGAATACAAAAATATTAGCTTCACCGTTTGGGATGTGGGTGGCCAGGACAAGATTCGTCCTTTATGGAGACACTATTTCCAAAATACACAAGGGCTTATCTTTGTTGTTGATAGCAATGATCGTGATCGTGTTGTTGAGGCCAGAGATGAACTTCACCGGATGTTGAATGAGGACGAGTTGAGAGATGCAGTACTTCTTGTATTTGCCAACAAGCAAGATCTACCAAATGCTATGAATGCTGCCGAAATCACAGACAAGCTTGGCCTTCATTCTCTCCGTCAGCGCCACTGGTACATCCAAAGCACGTGTGCCACTTCTGGTGAAGGACTCTATGAGGGACTGGACTGGCTCTCAAACAATATAGCCAACAAGGCTTAA	1752	0.4635	MASGLIPFLAMAFVQLGYAGMNIISKLAMQSGMNPIVLAAYRQIFATLAIAPFAFCFERKTVPKLTKPIMFQILLSSLTGVTGNQVFFFLGLKYSAATIACAMTNLLPAFTFILALIFRQEYLRIRAWSGQAKIVGTVLCVGGALVLSFYHGNVIEIGESIIHWGYAERMQETSSSGKANSFLGPFFLIVSALVWAVWFVVQADMAKHFPAPYTSTAYMCFLASFQCVVIALCFDHSASAWSLANPIRVISALYSGVLCTGVACALMSWIIESKGPLYVSVFTPLQLVITAFISWALLREEIYVGTVIGSLLIVLGLYSVLWGKNKEIAKKDQNEEDIEAAEKKAKEVKDSELGLHSLMVSSKLNDEFAARAPSRLHRLCSHCIRICTQISDRLIFLHLKEEMGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA	583

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju01g0295	583	SMART	arf_sub_2	403	583	-	-
	Alju01g0295	583	PANTHER	WAT1-RELATED PROTEIN	7	332	IPR030184	GO:0016020\|GO:0022857
	Alju01g0295	583	NCBIfam	small GTP-binding protein domain	418	552	IPR005225	GO:0005525
	Alju01g0295	583	Pfam	EamA-like transporter family	183	321	IPR000620	GO:0016020
	Alju01g0295	583	Pfam	EamA-like transporter family	11	147	IPR000620	GO:0016020
	Alju01g0295	583	Pfam	ADP-ribosylation factor family	409	579	IPR006689	GO:0003924\|GO:0005525
	Alju01g0295	583	PRINTS	GTP-binding SAR1 protein signature	449	473	IPR006689	GO:0003924\|GO:0005525
	Alju01g0295	583	PRINTS	GTP-binding SAR1 protein signature	476	501	IPR006689	GO:0003924\|GO:0005525
	Alju01g0295	583	PRINTS	GTP-binding SAR1 protein signature	521	542	IPR006689	GO:0003924\|GO:0005525
	Alju01g0295	583	PRINTS	GTP-binding SAR1 protein signature	421	444	IPR006689	GO:0003924\|GO:0005525

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju01g0295	Alju-ChrAlju01	2264232	2270863	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju01g0295	3	340	Nodulin-like Gene Family	AT1G09380	56.215	5.59e-140	409

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