Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0284 ATGGCGTCTTTGCAGCCCAACTTAGACTCTATTCATTCCGATACGTTGCCACCATCCACTCTTAAAAAGAGCACCAATTTTGGGGCCGATCCTAACGATCACAATTCTCTCCACCCCGTTCGATGGAGATCCGATACGGAGCGTCGGATCTACTCCTCTAAGCTCATCGAAGCTCTGCGCCACGTCCTCCGTCGTAGTCCTTCTCTCCCGCCCAAACCTGGCGGCGGTCGTGAAATTCGTGAGACGGCTGATAGAGTTCTAGCCGCGACGGCCAAGGGCAGAACTCGATGGAGTCGAGCGATTCTGGCTTCTCCGCTTGGCCGTTGGAGATTACAGAGGCAACACAAGAAGGTGAAGAAGATGACGAGAGGATTGAAGAAACCGGATATTAGGAAGGAGAGAAGGAGGTTACCGGCTCTGCAGAAGAAAGCGCGCGTTCTCGGCCGATTAGTTCCTGGTTGCCGTAAGGTTTCCTTTCCGAGTCTTCTGGAAGAAACCACTGACTATATATCGGCCTTGGAGATGCAAGTTCGAGCCATGACGGCACTCACCGAATTGTTAGCCGGTGGTGCCGCGCCGGCCGATCGACTCGACGGGCCTCGACCGTAA 609 0.5435 MASLQPNLDSIHSDTLPPSTLKKSTNFGADPNDHNSLHPVRWRSDTERRIYSSKLIEALRHVLRRSPSLPPKPGGGREIRETADRVLAATAKGRTRWSRAILASPLGRWRLQRQHKKVKKMTRGLKKPDIRKERRRLPALQKKARVLGRLVPGCRKVSFPSLLEETTDYISALEMQVRAMTALTELLAGGAAPADRLDGPRP 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0284 202 CDD bHLH_AtIBH1_like 131 184 IPR044549 GO:0006355
Alju01g0284 202 Gene3D - 112 190 IPR036638 GO:0046983
Alju01g0284 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 173 IPR011598 GO:0046983
Alju01g0284 202 MobiDBLite consensus disorder prediction 1 32 - -
Alju01g0284 202 MobiDBLite consensus disorder prediction 1 39 - -
Alju01g0284 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 43 187 IPR044660 GO:0006355
Alju01g0284 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 190 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0284 Alju-ChrAlju01 2207825 2208433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0284 41 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 51.678 2.77e-40 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0284 01 2207825 2208433 Alju03g3165 03 56182350 56182958 CCT
Alju01g0284 01 2207825 2208433 Alju03g3165 03 56182350 56182958 ECH
Alju01g0284 01 2207825 2208433 Alju01g0284 01 2207825 2208433 ECH