Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0280 ATGAAACAACTCCGTCAGCTAATCTTCCCTCTGGTTGGGTTCATAATCAAAGGATATTTCTGGATCGGTAATAGTATGGCGGCAAGTGATTGTGGCGGCAGGCAAATTGCCTACACAATTACTGTTGGTCAATCATACAGTCAGTTCAAAACAGTTCAAGCAGCGATCGATTCCATAAGCACCAACAATGCTCGCTGGGTTAAAATTCACATATATCCAGGCAAATATAACGAGCAGGTCCAGATTCCTTACGGGAAACCATGTATCTTCTTGGAAGGGGAGGGCAGAGCCGTTACGACAATAACGTACAACGGCCACCAACAAACAGATACCAGCGCCACATTCTCCTCCTTTCCCAGCAACGTCGTTGCCGCCGGCATCAACTTCGAGAACTCGTGGGATCTATCAGCGGGAGAAGACCAAGCCTTTCAACCAGCACTGGCAGCGAGAATATACGGGGACAAGTCTGCGTTCATCGATTGTGGCTTCTTGGGTTTCCAAGACACACTTTGGGATGTACAAGGTCGTCATTACTTTAAGAACTGTTATATCGAGGGTGCCGTTGACTTCATTTTTGGCAGTGGCCAGTCCTATTACGAGAATTGTTACGTGAATGTGTCGTTAAGCACGTCAAATGCTCATGTGGATATGGGATATATAACAGCACAAGGGCGAGGGTCAAACGAGGAGGCAAGTGGCTTTGTGTTCAAAGGAGGTATGGTAGTTGGAAGTGGTCTGGTTATGTTGGGAAGAGCCTATGGTCCTTACTCCAGAGTCATATTTCACGAGACGTATTTGCATTCAGTGGTTCATCCTCGGGGATGGGATGCTTGGAACTACGGAGGAAACGAGAAGAATTTGATGTACGCGGAAGTTAACTGTACAGGACCGGGGGCGAGTTTGGAGGAGCGCGTGCAGTGGGTGACGAAGCTCTCTGCCCTGCAGCTACAGCAGTTTTCGTTATCATCTTTCATAGACCAAGATCGGTGGCTTGCCAATTTACCTCGTCCGTCCTAG 1017 0.4798 MKQLRQLIFPLVGFIIKGYFWIGNSMAASDCGGRQIAYTITVGQSYSQFKTVQAAIDSISTNNARWVKIHIYPGKYNEQVQIPYGKPCIFLEGEGRAVTTITYNGHQQTDTSATFSSFPSNVVAAGINFENSWDLSAGEDQAFQPALAARIYGDKSAFIDCGFLGFQDTLWDVQGRHYFKNCYIEGAVDFIFGSGQSYYENCYVNVSLSTSNAHVDMGYITAQGRGSNEEASGFVFKGGMVVGSGLVMLGRAYGPYSRVIFHETYLHSVVHPRGWDAWNYGGNEKNLMYAEVNCTGPGASLEERVQWVTKLSALQLQQFSLSSFIDQDRWLANLPRPS 338
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0280 338 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
Alju01g0280 338 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 37 332 - -
Alju01g0280 338 Gene3D - 33 336 IPR012334 -
Alju01g0280 338 Pfam Pectinesterase 46 327 IPR000070 GO:0030599|GO:0042545
Alju01g0280 338 SUPERFAMILY Pectin lyase-like 36 332 IPR011050 -
Alju01g0280 338 FunFam Pectinesterase 34 335 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju01g0280 Alju-ChrAlju01 2172280 2173664 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0280 30 284 Carbohydrate Esterase AT2G19150 47.656 8.46e-75 230