Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0276 ATGCGCATAAATACAGATCCCGCCCCTCCCCGTTCCCAAGGCTTCAGTCATAGTGTCGACATGGTGTGCCAGGAAGACATGTTGATTTCAAAAATCCGGGAGCTGTATGACAAGATCTCAGGCCTTGATAGTCTGAAACCCTGCCAAAATGTCGACACCCTCTTTACCCAACTCGTCCTCACATGTATACCACCCAGCCCTATTGATGTCGCCACCCTCCCCAATAGCCTTCAAGAGATTCGTTCCAAACTCATTCGTCTCTGTGGCCAAGCAGAAGGCCTCCTTGAGAGCCACTACTCCACCATCCTCGGCTCCTTCGAAAACCCCCTTGACCACCTCGACATCTTCCCTTATTACTCCAACTACCTTAAACTTGGTCTCCTCGAATTCACCATCCTCACCCAGCACTGCACTCGTGTCCCTTCCAACATAGCTTTCATCGGCTCTGGTCCTCTTCCTTTCACTTCTATTGTGCTAGCCTCCAACCACCTCCCCACCACCACCTTCCATAACTATGACATCGACCCTCACGCCAATTCCATGGCCCTTCGCTTGTTTCCCTCTCACAATGATCTCTCCAAACGCATGGTTTTTCACACCAGTGACATCATGGACGTGACCGAGGACTTGGCGGAGTACGATGTTGTGTTTTTGGCGGCTCTTGTGGGGATGGACAACGAGGAGAAGAATCGGGTGATTGATCATCTGGCTAAGTATATGGCTCCAGGGGCACTTTTGATGCTGAGGAGTGCCCATGGGGCTCGTGCTTTTCTGTACCCTGTGGTTCAACCTGGCGATCTTCGAGGTTTTGAGGTTCTCTCTTTGTTTCATCCGACCGACGAGGTTATCAATTCTGTGGTCATCGCACAAAAGTATCCCCTGCCTCTACACAGCTCGCATGATCAGCAAGGTCTGATATTACCCAACAAGTGTTCTGAGATACAAGGGTTTAATCCCCTCGTCAGCCATGGGAATATGATTGAGGAGTTGACCGTTGAGGATCAGCTTTCTTAA 1014 0.503 MRINTDPAPPRSQGFSHSVDMVCQEDMLISKIRELYDKISGLDSLKPCQNVDTLFTQLVLTCIPPSPIDVATLPNSLQEIRSKLIRLCGQAEGLLESHYSTILGSFENPLDHLDIFPYYSNYLKLGLLEFTILTQHCTRVPSNIAFIGSGPLPFTSIVLASNHLPTTTFHNYDIDPHANSMALRLFPSHNDLSKRMVFHTSDIMDVTEDLAEYDVVFLAALVGMDNEEKNRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVQPGDLRGFEVLSLFHPTDEVINSVVIAQKYPLPLHSSHDQQGLILPNKCSEIQGFNPLVSHGNMIEELTVEDQLS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0276 337 Gene3D Vaccinia Virus protein VP39 24 293 IPR029063 -
Alju01g0276 337 PANTHER NICOTIANAMINE SYNTHASE 3 24 311 IPR004298 GO:0030410|GO:0030418
Alju01g0276 337 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 154 254 IPR029063 -
Alju01g0276 337 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 21 296 IPR004298 GO:0030410|GO:0030418
Alju01g0276 337 Pfam Nicotianamine synthase protein 25 292 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0276 Alju-ChrAlju01 2135012 2136025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0276 21 332 Nicotianamine Synthase Gene Family AT5G04950 57.233 1.37e-129 371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0276 01 2135012 2136025 Alju01g0276 01 2135012 2136025 ECH