LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju01g0264	ATGGAGATCGGGAGAAGACGTTCCCAGGGAAGCTTCCTCAGCTTGTTTGATTGTAATGGAGTATCTCGAAAGAAGCTGTTCCCTGCCACTCCTAGCTTGCCTGACGAATTGAAGCAAGCGAAGGAGAATATAGGGAACATGCCAGAATCACAGTTGAATACGAAAAAGGTGGATGAGAAAGGAATAAATCAAAGCAGGACAGCAAACTGTGAGCTATCAGCTGGTAGCGATATGCCATGTGAAACCAAGGCGCCATGCTTAGTAGCGAGATTAATGGGTTTGGATTTATTGCCAACTTCAACATTCGATAAGGTCTCTTTCACTGCATCGCGTTCCTCTAACTCTCTTGTATCTTCTCACTGTCATGAGGTCGCTGTGGATCACCCCATAAAATCAAGGGCACATAAAGCGGAAAACAGGACAATCGAAGCAAGACTGCCAAAGAATACATCTATGAGAGATCTTGATTTGAGGCAGAAACCAGAAGCTGCACTTCTTGCGTCCATGCATGAAAAGATAACGTATAAAAATACGGTCGAGGGTTCGAGATACTCAGAAAACATTGGTTTTCATCGTCAGGGGAGTAGAGGAAGCTCAACCTTACTTGCAATACAAGCCAAGGTCCGTGTTCAATGCAGAGATTTATTAACTTCAAATGGTGACAGGGGACATAAGCAAAGTGAACAGAATGTGATTGCTTCCAACCAGTTCTTCAGGAGTCAGAAGCCAATTTTAAAGCAGGCTGTGAAGCAGAGAACTTGTACAAGTCGGAATAGTCATTACAATGAGATTGAGCAGAATATGAAGATGCAGAATAGCGCTACTATTAAAGTCAGGTCAACTTCAATAGTAGAACCCAACAAACCCACCACGCGAAGTTCCACTGGTGGAGCAAGGAAGGTGACAAACAAGAATTTTGTAATTGACAATGTTAGACCCAACAGTTCTGGCAGAAGAGCAGCTGGTGCCAAGGAGGAGATTTCACTGATCAAGACGAAGAGTTGTAATTCCATGAGGAAAAGGTATCCCAAAAGGGATGTTCTTTCTGCTAATGTTGTTAATAGTTATCAAGGTAAGTCCATAAAATGCAATATAACAACTGAAGAGAGTATGAATCAGGATGCATTAAACAAGAAAACTGGCAAGGATGTTATTTCTTTTACGTTTACGTCTCCTTTGAAGAAAGAATCACAACCTTCGACTCATACAAACAACGTTCATGTCAGTGCTCCTGATTTACACATGACAGATGGTGATGCTTCAAGTGATCTGTTCAATGGAAAGGCACAAGATTTGGCATCTAGAATCAACTCACCGGAATGTACTCTGGCTACTAGGGTGCCTTCTGCTGTTTTACTTCCCAGTGAGGTTAGCATCGAATCTGGGGAAGGAGGCAGAAGTTTTCACTCTGGTATGATGCTTAACACGAATCAGCAGCTGCAGGGATCCAAAGCAATAAGACAACATAGTAGCGACAACAACATTGAAACTGAGTACTGTCAAGGTTTGAACACTGGTTTCGTTAGTCAAGCTGCGGAACAAGCATGTGGACTTTCATATTCAGAAGATTATAATAGGCCAAGGAACTTGAGGCTTGAACATGTAAAGGATATGCTTAGCTATGAAAAGTTAGTGGAAGAAAGTCTTTCACAGGATCAAACAATAAGAAATGAACAGGTTATAAAGACAAATGTTTTTGATGTGTTGGAGAAATGGAGCAGTGAAACAGAAAGCGACGGAGAAGAGAACTTTAAGGCAGAGAGGAATCTTTTGTTTGACTTTGTGAGCGAGTTTCTGGAATTAAGAAGAAGCAAGAGGTACAAGGGAAGGGCCCTAGAGAGTCAGATTTGGTGGGAAGAAGACTCGTGTAGAGAAATCAAGCGATTTAAAAGCATGCAAGAGATCATGGTGGATGAGCTTGTAAGCATGGACATGAGCTCTCCACAGGGCACGTGGCTCCATTTTCAGACTGAACATTTCCAGCAGAATTTACTCGCAGAGATTGAGTGGGACATCTCAACTTCTCTCATCAATGATCTGCTTCTTGATTTGATGCAACATTAA	2064	0.421	MEIGRRRSQGSFLSLFDCNGVSRKKLFPATPSLPDELKQAKENIGNMPESQLNTKKVDEKGINQSRTANCELSAGSDMPCETKAPCLVARLMGLDLLPTSTFDKVSFTASRSSNSLVSSHCHEVAVDHPIKSRAHKAENRTIEARLPKNTSMRDLDLRQKPEAALLASMHEKITYKNTVEGSRYSENIGFHRQGSRGSSTLLAIQAKVRVQCRDLLTSNGDRGHKQSEQNVIASNQFFRSQKPILKQAVKQRTCTSRNSHYNEIEQNMKMQNSATIKVRSTSIVEPNKPTTRSSTGGARKVTNKNFVIDNVRPNSSGRRAAGAKEEISLIKTKSCNSMRKRYPKRDVLSANVVNSYQGKSIKCNITTEESMNQDALNKKTGKDVISFTFTSPLKKESQPSTHTNNVHVSAPDLHMTDGDASSDLFNGKAQDLASRINSPECTLATRVPSAVLLPSEVSIESGEGGRSFHSGMMLNTNQQLQGSKAIRQHSSDNNIETEYCQGLNTGFVSQAAEQACGLSYSEDYNRPRNLRLEHVKDMLSYEKLVEESLSQDQTIRNEQVIKTNVFDVLEKWSSETESDGEENFKAERNLLFDFVSEFLELRRSKRYKGRALESQIWWEEDSCREIKRFKSMQEIMVDELVSMDMSSPQGTWLHFQTEHFQQNLLAEIEWDISTSLINDLLLDLMQH	687

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju01g0264	687	Pfam	Domain of unknown function (DUF4378)	532	679	IPR025486	-
	Alju01g0264	687	PANTHER	PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED	2	148	-	-
	Alju01g0264	687	Pfam	DUF761-associated sequence motif	80	102	IPR032795	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju01g0264	Alju-ChrAlju01	2062604	2064985	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju01g0264	3	99	TRM (TON1 Recruiting Motif) Superfamily	AT5G26910	42.718	9.68e-12	66.6