Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0249 ATGTCAACGGAGCGGCTGATTGAAGCTTCCGGTGCAATGTCAGAAGCATTATTGACTTCTCAGTCGTTCAGGCAATGCGGCGAACCTGATTGGATATTTGAAGAATTGCCCAAGGCCACCATTGTTTCCGTTTCCAGACCAGACACCGGAGATATTAGTCCAATCCTTCTGTCTTACACCATTGAGTTGGATTACAAACAGTTCAAATGGCGCTTAATGAAGAAAGCCTCACAAGTTCTCTACTTACATTTCGCTTTGAAGAAACGTGCATTAATTGAAGAATTTTATGACAAGCAGGAGCAGGTAAAAGAATGGCTACAAAGCTTAGGAATATTTGATCAAACAACGATGGTGCAAGATGCTGAAGAACCTGACGATGGGGCTGTGCCTTTACATCATGAAGACAGTATTAGGAACAGATATGTACCATCCGCGGCAGCTCTACCAATCATTCGTCCATCACTAGGAGGGCAGCAGTCAGTTGCAGATAAAGCAAAAGTCGCAATGCAGGGTTACTTGAATCATTTCCTTGGAAACTTGGATATTGTCAATTCTCGAGAGGTCTGCAAGTTCTTGGAGGTCTCTAGGTTATCCTTTTTACAGGATTATGGATCAAAAATGAAAGAGGGCTATGTAATGGTGAGGAACTTATCAAATATCTCAAGGGATTCTGATGTAACATGTTTTCCATGCGAATGGCTTGGTTTGTGTAATAACAACTGGTCCAAGGTGTGGGCTGTCCTGAAACCTGGCTTTCTGGCCTTGCTGGATGATCCTTTCAGCAACAAACCGGTAGATATACTTGTTTTTGATATCCTCCCTTCATCGAGTGAAGATAAGGGTTCCCCGATATATTTGGCTGATCATGTCAAGGAACGCAATCCCTTAAGATACACATTTAAGGTAACCAGCGGAAATCGGAGCATAAGTTTGAGAACTAGCAGCAGTGCCAAAGTTAAAGATTGGGTTACTAAAATTAACGAAGCTGCTCTTAGACCTCAAGAGGGTTGGTGTCGTCCTCATCGCTTTGGTTCATTTGCACCCATCAGAGGTTTGACTGAAGATGGAAGTCAAGCCCAGTGGTTTATAGATGGGAAGGCAGCATTTGAAGCAATTGCTTCCTCAATTCAGGAAGCAAAGTCAGAGATCCTTATCACTGGATGGTGGCTTTGCCCAGAGCTCTATCTGAAACGTCCTTTTCACTCTCATTCTTCCTTTAGGCTGGACGCATTACTAGAAGAAAAGGCCAAACAAGGAGTTAAGATCTATGTGCTTCTGTACAAGGAGGTCTCTTTAGCTTTAAAAATCAACAGCTTGTACAGTAAGAGAAGACTCCTCAACATTCATGAAAATGTAAGAGTATTGCGGTATCCGAACCATTTATCTGCTGGTGTCTATTTATGGTCGCACCATGAAAAACTTGTAATCATTGATTACAAGATTTGCTATTTGGGAGGACTAGACTTATGCTTTGGCCGTTATGACACAACAAAACACGAAGTGGCTGATTTCCCCTCCGAAATATGGCCTGGAAAGGACTATTACAACCCAAGAGAATCTGAACCTAATTCATGGGAAGACACCATGAGAGATGAACTGGATCGTGAAAAGTATCCCCGCATGCCGTGGCACGACGTCCACTGTGCTATTTGGGGACCTCCCTGTCGTGACATTGCTCGTCACTTTGTTCAACGTTGGAACCATGCCAAGAGAACTAAAGCTCCAAATGAACATACCATTCCTCTACTTATGCCGCACCACCACATGGTCATCCCTCACTACATGGGAAGAAGCAAAGAGATTGATATCGATGGATGCAAAGAAGATGACAAGAAAGAAGCTGAAAGTCAGAGTTCGTCTTCGTCACAATCTCCCCCGCGAGATATACCATTGCTTCTACCTCAAGAAGCTGGTGGAGAATATCTTAAGTTAATTGGGAACAATATGAATATTAATCTCGTGGATCAGAAAAGTTTTTTCGAAAGCCGAAATCCAAGCGACGAAACTTCAGATGCTCAGGTGGAAGGTTTTCCAATTGAATTTGATCCTTTTGACTTGGAGAGACAATATCCCATGGATGCTTCAGATGATTGCTGGGAAACATCTGAAGAAGGTTACTGCGATGCCACTGCTACGGAATATGGAGAAGTTGGTCCTCGTACTAAATGTCGTTGTCAGGTAATCAGGAGCGTTAGCCATTGGTCTGCTGGAACAAGTCAGGCTGAAGAAAGCATTCACACTGCTTATTGTTCTCTCATCGAAAAAGCGAAACATTTTATCTACATTGAGAACCAGTTTTTCATATCAGGCCTGGCAACAGATGATACTATACAGAACCGTGTGTTGGAAGCATTATATAGGCGTATTTTACTGGCTCACAAAGAGCAAAAGCCTTTTAGAGTAATAATTGTGATGCCTCTATTGCCAGGCTTCCAGGTAAATTTGACTGGCCTGCGTTGCGTAATATTCACTCCTTTATGCTACGGGCTAGAAATAACTTCTATTGTAAATTGCCATTACCAGGGTGGTCTAGATGATGGTGGTGCAGCAACTGTGAGAGCCATAACACATTGGCATTATCGAACAATCTCTAGAGAAAAACACTCCATATTAGCGAACCTCAGAGCTGTGCTTGGCCCTAAGACTGAAGATTACATTTCTTTCTATGGTCTGCGTTCTCATGGCAGACTCTCTGCTGATGGACCTATGGTTACAAGTCAGGTCTATGTACACAGCAAATTGATGATCGTAGATGACCGTGCTGCGATAATTGGGTCTTCAAATATAAATGATAGGAGTCTGCTAGGTTCAAGAGACTCTGAGATTGGAGTGGTAATCGAAGACAAGGAGTATGTCAAGTCATCTATGCATGGAAAACCATGGAAGGCTGGGAAACTTGCTTATAGCCTCCGTTGCTCCCTATGGTCTGAGCATCTTGGTCTAAATACCGGAGAGATAAATAAAATCAGTGATCCAGTAGCAGATACAACTTACAAGGACTTGTGGTCAGCAACTGCAAAGGAAAATACTAGGATATACCATGAGGTATTTTCCTGCATACCCAATGATCACATATACTCCAGAGCTGCACTTAGGCAAAACGTGGCTCACTTGAAGGAGAAGCTTGGTCATACTACTATAGACTTCGGAATAGGCCCGTATCAAACAGAGCCCGCAGACAGACTGAAGCGCATAAAGGGGCATCTTGTCTGTTTTCCTTTGGAATTCATGCGTGGAGAAGATTTAAGACCAGTTTTCAATGAGACTGAGTTTTATGTATCTCCTAATGTATATCATTAA 3300 0.4276 MSTERLIEASGAMSEALLTSQSFRQCGEPDWIFEELPKATIVSVSRPDTGDISPILLSYTIELDYKQFKWRLMKKASQVLYLHFALKKRALIEEFYDKQEQVKEWLQSLGIFDQTTMVQDAEEPDDGAVPLHHEDSIRNRYVPSAAALPIIRPSLGGQQSVADKAKVAMQGYLNHFLGNLDIVNSREVCKFLEVSRLSFLQDYGSKMKEGYVMVRNLSNISRDSDVTCFPCEWLGLCNNNWSKVWAVLKPGFLALLDDPFSNKPVDILVFDILPSSSEDKGSPIYLADHVKERNPLRYTFKVTSGNRSISLRTSSSAKVKDWVTKINEAALRPQEGWCRPHRFGSFAPIRGLTEDGSQAQWFIDGKAAFEAIASSIQEAKSEILITGWWLCPELYLKRPFHSHSSFRLDALLEEKAKQGVKIYVLLYKEVSLALKINSLYSKRRLLNIHENVRVLRYPNHLSAGVYLWSHHEKLVIIDYKICYLGGLDLCFGRYDTTKHEVADFPSEIWPGKDYYNPRESEPNSWEDTMRDELDREKYPRMPWHDVHCAIWGPPCRDIARHFVQRWNHAKRTKAPNEHTIPLLMPHHHMVIPHYMGRSKEIDIDGCKEDDKKEAESQSSSSSQSPPRDIPLLLPQEAGGEYLKLIGNNMNINLVDQKSFFESRNPSDETSDAQVEGFPIEFDPFDLERQYPMDASDDCWETSEEGYCDATATEYGEVGPRTKCRCQVIRSVSHWSAGTSQAEESIHTAYCSLIEKAKHFIYIENQFFISGLATDDTIQNRVLEALYRRILLAHKEQKPFRVIIVMPLLPGFQVNLTGLRCVIFTPLCYGLEITSIVNCHYQGGLDDGGAATVRAITHWHYRTISREKHSILANLRAVLGPKTEDYISFYGLRSHGRLSADGPMVTSQVYVHSKLMIVDDRAAIIGSSNINDRSLLGSRDSEIGVVIEDKEYVKSSMHGKPWKAGKLAYSLRCSLWSEHLGLNTGEINKISDPVADTTYKDLWSATAKENTRIYHEVFSCIPNDHIYSRAALRQNVAHLKEKLGHTTIDFGIGPYQTEPADRLKRIKGHLVCFPLEFMRGEDLRPVFNETEFYVSPNVYH 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0249 1099 SMART pld_4 466 493 IPR001736 GO:0003824
Alju01g0249 1099 SMART pld_4 906 933 IPR001736 GO:0003824
Alju01g0249 1099 Gene3D - 199 335 IPR011993 -
Alju01g0249 1099 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 906 933 IPR001736 GO:0003824
Alju01g0249 1099 PANTHER PHOSPHOLIPASE D 163 810 IPR015679 -
Alju01g0249 1099 Pfam PLD-like domain 750 953 IPR025202 -
Alju01g0249 1099 CDD PLDc_vPLD1_2_yPLD_like_1 359 503 - -
Alju01g0249 1099 Gene3D Endonuclease Chain A 353 590 - -
Alju01g0249 1099 Pfam PH domain 208 329 IPR001849 -
Alju01g0249 1099 CDD PH_PLD 183 329 - -
Alju01g0249 1099 SUPERFAMILY PH domain-like 200 334 - -
Alju01g0249 1099 SUPERFAMILY Phospholipase D/nuclease 716 953 - -
Alju01g0249 1099 MobiDBLite consensus disorder prediction 606 632 - -
Alju01g0249 1099 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 466 493 IPR001736 GO:0003824
Alju01g0249 1099 CDD PLDc_vPLD1_2_yPLD_like_2 737 950 - -
Alju01g0249 1099 Gene3D Endonuclease Chain A 700 965 - -
Alju01g0249 1099 PIRSF PLD_euk 838 1099 IPR016555 GO:0004630|GO:0006654|GO:0048017
Alju01g0249 1099 PIRSF PLD_euk 11 820 IPR016555 GO:0004630|GO:0006654|GO:0048017
Alju01g0249 1099 ProSiteProfiles PH domain profile. 205 331 IPR001849 -
Alju01g0249 1099 Pfam Phospholipase D Active site motif 466 493 IPR001736 GO:0003824
Alju01g0249 1099 SUPERFAMILY Phospholipase D/nuclease 318 586 - -
Alju01g0249 1099 SMART PH_update 206 333 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0249 Alju-ChrAlju01 1945908 1952601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0249 1 1099 Phospholipase D Gene Family (Wang group) AT3G05630 63.491 0.0 1404