Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0240 ATGGCAAATCGAGAAGCTGCACAGAGAAGGAGGAGACTAGCCATAATCGGCGTGTCCAGTTTCTTGCTGGTGGCCATGGCGGTGGCCGTCACGCTAGGTGTCAGCATGAACCAAAGCGATTCTGAATCAAGCCAACCAAAAGGCAACAACAAGTCCCATGTCTCAGATTCAAAGAAAGCCGTAACAGACCTCTGTCGTCCCACCGATTACAAAAAGGAGTGCGAGGACAGTATCAAGTCGGAGGCCGGCAACACCACCGACCCTAAAGAACTCATCAAGATCGCCTTCAACATCACCATTCGCTCCGTCGGCGAGTCTCTCCAGAAAACCCGTCTCATCCATGAGATCGAGAAAGAACCCAGATCCAAGATGGCACTCGACTCCTGCATGCACCTCATGGCCCTCTCCATCGGCGAGTTCCGAAAATCCGTCCAAAATATGGGCTCTTTTGATCTCACCGACGTCGACGACATGCTCATGAACCTCAAGGTTTGGATCAGCGGCGCCATCACCTACCAACAAACCTGTTTGGACGGATTTCAAAACACCACCAGCCCGGCCGGTAAACAGATGCAGGATGTTTTGAAACTCACCATGAAACACAGCAGCAACATTCTCGCCATCATCAATGACTTTGCTAACAGTCTCGCTCAATTTAACTTCTCAAGCTCAACTACCTCACGTCGTCTCCTTCATGATGTTTTCGACATTCCCGTCTGGGCTCAATCTGGTATGAGAAGACTTCTCGCCACCGGCAAGCTCAGGCCCAATGTGGTTGTAGCCAAGGATGGGACTGGAAAAGTCAGGACCATTAACCAAGCCTTGAAAATGGTCCCCATAAATAACGTGAAGCCTTTCGTCATCTACATTAAGGAAGGAGTCTACCGCGAGTACGTTCACGTCATGACCAACATGACCCGCGTCGTCATGATCGGCGACGGAGCTCACAAGACCCGAATCACCGGCAATAGAAACTTCGTTGACGGCATTGGCACCTTCAGGACCGCCACCGTTGCCGTTGATGGAGATTTCTTTGTTGCGATGAAGATTGGGTTTGAGAACTCGGCTGGACCCGAGAAGCATCAAGCTGTAGCCCTGAGAGTGCAAGGTGACATGGCAGTGTTGTACAAATGCGCCATGGATGGGTACCAGGACACACTCTACGCACACGCGATGCGTCAATTCTATAGGGACTGTACCATTTCCGGTACGGTGGACTTCATCTTCGGCGATGCCGTGTCGGTGTTCCAGAACTGCACATTCGTGTTGAGGAAGCCATTGGAGGAACAACAATGTATCGTGACGGCGCAGGGAAGGAAGGACAGGCACCAGCCGACGGGAATAGTGATCCAGGGAGGGTCCATCGTAGCAGATTCCGAGTTCTACGCAGATAGGTTCAAGAACAAGGTTTACTTGGCACGGCCATGGAAGATATATTCGAGAACCATATTCATGGAGACGTTCATGGGTGACTTGATCGACGGTGATGGGTTTTTGCCGTGGGAAGGCACACTGGGGCTGGACTCGTGCTATTATGCAGAGTACAATAACAGCGGCCCTGGTTCTGATAAATCCAAACGTGTTAAATGGGGCGGCATCAAGAGCATCACTCCCCAACAGGCAAACACTTGGACGCCTCTCAACTTCTTCAAGGGGGACAAGTGGATTAAGATTACTCGCATTCCTTACAACCCTTCCTCTTGGACCTCCTAA 1713 0.5108 MANREAAQRRRRLAIIGVSSFLLVAMAVAVTLGVSMNQSDSESSQPKGNNKSHVSDSKKAVTDLCRPTDYKKECEDSIKSEAGNTTDPKELIKIAFNITIRSVGESLQKTRLIHEIEKEPRSKMALDSCMHLMALSIGEFRKSVQNMGSFDLTDVDDMLMNLKVWISGAITYQQTCLDGFQNTTSPAGKQMQDVLKLTMKHSSNILAIINDFANSLAQFNFSSSTTSRRLLHDVFDIPVWAQSGMRRLLATGKLRPNVVVAKDGTGKVRTINQALKMVPINNVKPFVIYIKEGVYREYVHVMTNMTRVVMIGDGAHKTRITGNRNFVDGIGTFRTATVAVDGDFFVAMKIGFENSAGPEKHQAVALRVQGDMAVLYKCAMDGYQDTLYAHAMRQFYRDCTISGTVDFIFGDAVSVFQNCTFVLRKPLEEQQCIVTAQGRKDRHQPTGIVIQGGSIVADSEFYADRFKNKVYLARPWKIYSRTIFMETFMGDLIDGDGFLPWEGTLGLDSCYYAEYNNSGPGSDKSKRVKWGGIKSITPQQANTWTPLNFFKGDKWIKITRIPYNPSSWTS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0240 570 FunFam Pectinesterase 57 213 - -
Alju01g0240 570 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 212 IPR035513 -
Alju01g0240 570 Gene3D - 251 566 IPR012334 -
Alju01g0240 570 NCBIfam pectinesterase inhibitor domain 30 210 IPR006501 GO:0004857
Alju01g0240 570 MobiDBLite consensus disorder prediction 38 60 - -
Alju01g0240 570 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 212 IPR035513 -
Alju01g0240 570 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Alju01g0240 570 PANTHER PECTINESTERASE 18 557 - -
Alju01g0240 570 Pfam Plant invertase/pectin methylesterase inhibitor 60 208 IPR006501 GO:0004857
Alju01g0240 570 FunFam Pectinesterase 251 567 - -
Alju01g0240 570 Pfam Pectinesterase 257 553 IPR000070 GO:0030599|GO:0042545
Alju01g0240 570 SMART PMEI_2 56 208 IPR006501 GO:0004857
Alju01g0240 570 SUPERFAMILY Pectin lyase-like 255 563 IPR011050 -
Alju01g0240 570 CDD PMEI-like_3 64 214 - -
Alju01g0240 570 ProSitePatterns Pectinesterase signature 1. 282 301 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0240 Alju-ChrAlju01 1903634 1905643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0240 5 570 Carbohydrate Esterase AT3G05610 46.447 0.0 568