Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0201 ATGGAGAAGACAATGAAGGTGCTCCATCGCAAATCTGAAGTCAAAACGTCGTCCGCCATCATCTGTCACCTCCTCACGCCATCCTTGCAACGTCCTCCTTCATGCTCAGGAATGGAGGACGAGAGGCTGTTGCCGATTGCAAACGTGGGAAGGATAATGAGGCAAATACTTCCCGCGAGTGCGAAGATCTCAAAAGAAGGGAAGCAGATAATGCAAGAGTGTGCGACTGAGTTCATAAGCTTTGTGACAGAAGAAGCTTCTGACAAGTGTCACAAAGAGAATCGCAAGACCCTCAACGGGGATGACATCTGTTGGGCCCTAAGCGCTTTAGGGTTTGATAATTATGCTGAGGCCATTGCAAGGTACTTGCATAAATACAGGCAAGCTCAGACACACAAAATGATCAATCTCCAGAAACCTAATAACAAAGCTCATGATCACCAAACGCATCACCACTTGCTTCAGAATTCTCCGGCCCCCTCCCTCGTCCCAAGCGACAAGCAACAGACTGACATTTGTGCTTCGGCATCAGAGAATAGGGTTTCTGATGATGAAGAGAAGGCTCCTGCAACTAATTAA 579 0.475 MEKTMKVLHRKSEVKTSSAIICHLLTPSLQRPPSCSGMEDERLLPIANVGRIMRQILPASAKISKEGKQIMQECATEFISFVTEEASDKCHKENRKTLNGDDICWALSALGFDNYAEAIARYLHKYRQAQTHKMINLQKPNNKAHDHQTHHHLLQNSPAPSLVPSDKQQTDICASASENRVSDDEEKAPATN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0201 192 PRINTS CCAAT-binding transcription factor subunit A signature 109 127 - -
Alju01g0201 192 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Alju01g0201 192 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Alju01g0201 192 MobiDBLite consensus disorder prediction 178 192 - -
Alju01g0201 192 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 43 107 IPR003958 -
Alju01g0201 192 MobiDBLite consensus disorder prediction 153 177 - -
Alju01g0201 192 SUPERFAMILY Histone-fold 40 143 IPR009072 GO:0046982
Alju01g0201 192 MobiDBLite consensus disorder prediction 141 192 - -
Alju01g0201 192 Gene3D Histone, subunit A 34 183 IPR009072 GO:0046982
Alju01g0201 192 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 33 153 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0201 Alju-ChrAlju01 1587125 1589881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0201 38 150 CCAAT-HAP3 Transcription Factor Family AT1G09030 64.912 5.17e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Alju01g0201 CBFD_NFYB_HMF 3.7e-24 CL0012