Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0186 ATGTCCAGTTGGAGGTCCCTACCAGGTGAATTTCCCAGCACCGGGAAGAACTTGACGGCGACGATGTATCTGAAATCTATAGTGGTGCTAAACGTGGAGGCCAGAGCGAGGCAAAGGGACTATCCTAGGGATTCGTTGCAGTGGTTATCTGTGAGGCAGGAGAAATCTGAAGGGATTAGGAGAGCAACCATGGCAGATGAAACACCTGATGATAAGAAGGAGGAGGTTCCTGAAACTGCCCCATTTGATCCTACTAAGAAGAAGAAGAAGAAGAAAGTTGCAATTATAGATCCTGCTAATGATTCAGTCGACAACTTGGCTGATAAGACAGAAAACTTGTCTGTTTCGGATGGGTTTGAGACTTTATTTGGTGGTTTAAAGAAGAAGAAGAAGAAGCCAGTTGAAACCAGTAACTTTACTGATGAGGGTGGAGATGCTGCTGAAGATTTAGATGACCACTCTGGAGAGGATGAAGGAGAAGGTGACGCCTTGGCCCCTCATTATCCTTGGGAAGGTACCGACCGTGATTATCTATATGAGGAGCTTATTGGCAGGGTGTTTGACATTCTACGTGAGAATAATCCAGATCTGGCTGGGGATCGTCGGAGGACTGTCATCAGGCCTCCTCAAGTTCTTCGTGAGGGCACAAAGAAAACTGTTTTTGTGAATTTTATGGATCTATGCAAAACGATGCATCGGCAGCCTGACCATGTCATGGCATTTTTGCTTGCTGAACTGGGTACAAGTGGGTCACTAGATGGACAGCAGAGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTTTGCGGCGATATATCAATGAATACGTCATTTGCATTGGATGCAAGTGTTCAGAAACAATACTTACAAAGGAGAACCGTCTGTTCTTTCTTCGATGTGAGAAGTGTGGATGTGGGAGATCAGTTGCTCCCATCAAGGCTGGTTTTGTTGCTCGTGTTGGACGTAGGAATGCAGGGGCATGA 996 0.4558 MSSWRSLPGEFPSTGKNLTATMYLKSIVVLNVEARARQRDYPRDSLQWLSVRQEKSEGIRRATMADETPDDKKEEVPETAPFDPTKKKKKKKVAIIDPANDSVDNLADKTENLSVSDGFETLFGGLKKKKKKPVETSNFTDEGGDAAEDLDDHSGEDEGEGDALAPHYPWEGTDRDYLYEELIGRVFDILRENNPDLAGDRRRTVIRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICIGCKCSETILTKENRLFFLRCEKCGCGRSVAPIKAGFVARVGRRNAGA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0186 331 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 180 330 IPR045196 GO:0003743|GO:0006413
Alju01g0186 331 Pfam Domain found in IF2B/IF5 201 309 IPR002735 GO:0003743|GO:0006413
Alju01g0186 331 MobiDBLite consensus disorder prediction 142 158 - -
Alju01g0186 331 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 280 315 IPR016190 GO:0003743|GO:0006413
Alju01g0186 331 MobiDBLite consensus disorder prediction 47 88 - -
Alju01g0186 331 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 177 283 IPR016189 GO:0003743|GO:0006413
Alju01g0186 331 MobiDBLite consensus disorder prediction 54 85 - -
Alju01g0186 331 Gene3D - 174 316 - -
Alju01g0186 331 MobiDBLite consensus disorder prediction 130 169 - -
Alju01g0186 331 SMART eIF2Bneu4 201 310 IPR002735 GO:0003743|GO:0006413
Alju01g0186 331 FunFam Eukaryotic translation initiation factor 2 subunit 174 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0186 Alju-ChrAlju01 1405286 1411880 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0186 64 327 Eukaryotic Initiation Factors Gene Family AT5G20920 71.536 5.78e-127 362