Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0179 ATGGAAGTGAATACCAGTTTTTCTGTAGCCACAGAATCACCCAGTGTTGCCTCCACACGGAACCACTCACATCTCGAACAGCACAACACGCATCATCACCATCATCCCCACCTCCCCTCCAAAACCATTCTCATAGTGGTTATAACCCTTACTTCCTTCATGCTTCTCCTCGCCATTTCTCTCATCATATTCCTCCTCCGTCGCCTCAAATCCTCCCCCAAGAACCCAACTACTAAACTCGGCGGCGAAGAGTTTCACGACACCAGTAGCAGATTCGTCGCCTCATCAACAGCTTCCAACTTCACTTGTAGCCCAGATGTGAAGGGTAGCTGTATGTATGGAGGAAACATAAACAGAGCATCTGCACCTAAATTCAGGGGAGTGCAAGTGTTCACATATAAGGAGCTAGAAGTGGCGACGGAGGGATTCAATGAAGCCAATATAATTAGCAATAATGGAGGATTTGGTTTGGTGTACAAGGGAGTCTTAAGTGATGGCACTCTGGCCGCCATTAAGCTGTTGCAGAGACAGGGTAAGCAAGGCGAGCGTGCCTTCAGAATAGAGGTGGATCTTCTAAGCCGATTGCACTCTCCTTATTTGGTGGAGTTAATTGGGTATTGCGCTGACCAGCACCACAGGCTCCTCGTCTTTGAATATGTGGCCAATGGGACGCTCCGGCACCATCTTCACTCTGATCACGATCGTGCTCAGCCGTTGGATTGGTGGACCCGCATGAGGGTGGCCCTCGATTGTGCCAGGGCCTTGGAGTTCCTGCACGAGCATGCCGCCACGCCTGTGATACACCGCGACTTCAAGTCCCACAATGTCGTGCTGGATCATAACTTCCGAGCCAAGGTTTCTGACTTTGGATTGGCCAGGATGGGCTCAGAAAAGATCAATGGTCTAGTTTCCACCAGGGTTTTGGGGACCACTGGATACCTGGCTCCAGAGTATGCATCTACAGGGAAGCTTACCACAAAGTCAGATGTATACAGCTACGGTGTGGTTCTTCTAGAGTTGTTGACGGGGCGAGTTCCCGTTGATATTAAGCGTCCCCCTGGTGAACATGTCCTTGTCTCTTGGGCTCTTCCGAGGTTAACAAACAGAGAAAAGGTGGTGGAAATGGTTGATCCAGCTCTGCGAGGACAGTATTCTAAGAAGGATCTAGTGCAGGTGGCGGCCATAGCAGCAATGTGCATACAGCCAGAGGCAGATTATAGGCCGCTAATGACAGATGTAGTGCAGTCACTAGTACCACTAGTTAGAAACCCATCTTCTGTTAGTTCATCCAGTTCATTAAGATTTAAGAAACATACATCAAGTCCAGGCCATTAA 1335 0.4929 MEVNTSFSVATESPSVASTRNHSHLEQHNTHHHHHPHLPSKTILIVVITLTSFMLLLAISLIIFLLRRLKSSPKNPTTKLGGEEFHDTSSRFVASSTASNFTCSPDVKGSCMYGGNINRASAPKFRGVQVFTYKELEVATEGFNEANIISNNGGFGLVYKGVLSDGTLAAIKLLQRQGKQGERAFRIEVDLLSRLHSPYLVELIGYCADQHHRLLVFEYVANGTLRHHLHSDHDRAQPLDWWTRMRVALDCARALEFLHEHAATPVIHRDFKSHNVVLDHNFRAKVSDFGLARMGSEKINGLVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPPGEHVLVSWALPRLTNREKVVEMVDPALRGQYSKKDLVQVAAIAAMCIQPEADYRPLMTDVVQSLVPLVRNPSSVSSSSSLRFKKHTSSPGH 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0179 444 FunFam Serine/threonine-protein kinase PBS1 111 219 - -
Alju01g0179 444 MobiDBLite consensus disorder prediction 1 23 - -
Alju01g0179 444 FunFam Receptor-like serine/threonine-protein kinase ALE2 220 435 - -
Alju01g0179 444 Gene3D Phosphorylase Kinase; domain 1 116 219 - -
Alju01g0179 444 Pfam Protein tyrosine and serine/threonine kinase 152 417 IPR001245 GO:0004672|GO:0006468
Alju01g0179 444 MobiDBLite consensus disorder prediction 1 36 - -
Alju01g0179 444 ProSiteProfiles Protein kinase domain profile. 144 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0179 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Alju01g0179 444 CDD STKc_IRAK 153 420 - -
Alju01g0179 444 Gene3D Transferase(Phosphotransferase) domain 1 220 437 - -
Alju01g0179 444 MobiDBLite consensus disorder prediction 424 444 - -
Alju01g0179 444 SUPERFAMILY Protein kinase-like (PK-like) 125 417 IPR011009 -
Alju01g0179 444 PANTHER OS01G0750732 PROTEIN 19 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0179 Alju-ChrAlju01 1380104 1382786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0179 111 443 Receptor kinase-like Gene Family AT3G58690 62.059 2.08e-150 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Alju01g0179 PK_Tyr_Ser-Thr 3.3e-43 CL0016