Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0176 ATGGTCCTGGAGGCTGTGGTTTTCCCCTCCCTCGACCCTCTCTCTCATCTTCCCCTCAAAGACACTAATCTCTTCCCTTTCAACTCCTCCTTCTTCGACGACCCTCTTCTCCAAAACAACAATCATCTTTCTGCAGATCATTGGGATTGTGTCAATGATGTTCCTCTCTCCAACCCTTCCTCCTCCGACACCGCCGTTTCTTTTCCTCCTCCTCCTCCGGTTGCCGCTCGTCCCAAGAGGCGTCGCCCCAAAACCCGAAAGAATCAGCAAGAAATCGAGAACCAGAGAATGACTCACATTGCCGTCGAGCGCAACCGAAGGAAACAGATGAATGACTATCTCTCTGTTCTCCGCTCTCTCATGCCCGACTCCTACCTCCAAAGGGGTGATCAGGCTTCTATAATTGGAGGGGCTATTAATTTTGTCAAGGAGCTGGAGCACAGGCTCCAATTTCTGGGTTCTCAGAAACAAACAGAGGCCACATGGGAATCATGCCCTTCTGCAAAGTTACCTTTCTCTGAGTTCTTCACCTTTCCTCAGTACTCAACTGGTGCGACTTCCACTACTGGTGGGTACGACAATAATAATTCAGGGCATGTGGGAGAGGGATCAGTGGGAGAGGCAATTCAGTCAGGGATTGCTGATATAGAAGTGACGATGGTGGAGAGCCATGCAAATCTCAAAATAAGATCCAAGAAGCGACCCAAGCAGCTCTTGAAATTAGTCTCCGGCTTGCATTCCATGCGTCTCACCATCTTGCACTTGAACGTCACAACCACCGCCCAAATTGTCCTTTACTCTCTCAGTGTTAAGGTAGAAGATGATTGCAAGCTGGGTTCAGTGGATGATATAGCGGCAGCTTTATATCAAATGATGGACGGCATTCATCAGGAGTCACTGTTGTGCTAA 909 0.4884 MVLEAVVFPSLDPLSHLPLKDTNLFPFNSSFFDDPLLQNNNHLSADHWDCVNDVPLSNPSSSDTAVSFPPPPPVAARPKRRRPKTRKNQQEIENQRMTHIAVERNRRKQMNDYLSVLRSLMPDSYLQRGDQASIIGGAINFVKELEHRLQFLGSQKQTEATWESCPSAKLPFSEFFTFPQYSTGATSTTGGYDNNNSGHVGEGSVGEAIQSGIADIEVTMVESHANLKIRSKKRPKQLLKLVSGLHSMRLTILHLNVTTTAQIVLYSLSVKVEDDCKLGSVDDIAAALYQMMDGIHQESLLC 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0176 302 PANTHER MAX DIMERIZATION, MAD 69 298 - -
Alju01g0176 302 SMART finulus 100 151 IPR011598 GO:0046983
Alju01g0176 302 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 94 158 IPR036638 GO:0046983
Alju01g0176 302 Gene3D - 84 160 IPR036638 GO:0046983
Alju01g0176 302 Pfam Helix-loop-helix DNA-binding domain 95 146 IPR011598 GO:0046983
Alju01g0176 302 CDD bHLH_AtFAMA_like 97 164 - -
Alju01g0176 302 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 94 145 IPR011598 GO:0046983
Alju01g0176 302 MobiDBLite consensus disorder prediction 59 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0176 Alju-ChrAlju01 1344563 1345642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0176 1 272 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 47.468 1.51e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju01g0176 HLH 3.3e-10 No_clan