Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0167 ATGGCGAATGGCGGTGACATGGCCTCCCATAATGTTGGTTGCTTATGTGACAGTAAAATGGATTCCGTCAACAACACAAAGACAGTCCCAGCGAATGATGATTCTTTAGTCAAACATAAAAAACGAAGCTTTCCGTTTCGTTCCTCCACTTCTGCCCAAGACTTGAGGCATTTTGAACTGGAGAAAGAGAAAGAAGACGTTTCATCTCCTAGAGGAGTGTTAGAGGTCTGCTATCGTGACTTTGATTCTTCTCTACAATCATCCGAAATGGAGAACCGTTGTTCAATGTCCCACAGGGCACAAATTAGTTGGAGCAAATATTTCAAAAATTTGAAAAAGAGATCAATGAAGCGTCTAGCCTCCTTCCCTTCTCATGGTGCGCCAACGGTACCAAAAGGGAAAAGCAAAAGCAGTAGAGAAAATCCTGTTTTGACTAATAATGCATACAAGTTCAGATCTTCATTGGCGAACTTCAGACTCTCTGATTTGAGAAATGCAACCAACCATTTTAGTAATGAATATTTGATTGGAAGAGGTGGCTATTCTGAAGTTTACTGGGGTCGTCTCAAAGATGGCAGTCTAGTAGCTATCAAGAGACTAACTAAAGGGACTCCAGACGAGAGGACTGCAAGCTTTCTATCTGAGCTGGGCATTATTGCTCACGTTGACCATCCCAATATTGCAAAGCTTATTGGATGTGATGTAGGAGGAATGCACCTTGTCTTCCAACTTTCTCCGCTCGGAAGTTTAGGATCTCTCCTTCATGGTCCAAGTAAAAACAAGTTAGATTGGAGTAAAAGGTATAATATTGCTCTGGGCATAGCCAATGGCCTTCTTTACCTTCATGAGTGCTGTCACAGGCGAATCATTCATAGAGATATTAAGTCAGAAAATATCCTGCTCACTAAAAGCTTTGAGCCACAGATTTGTGATTTTGGGATGGCAAAATGGTTACCCAGACAATTGAGCCACCATAATGTATCAAAGTTTGAAGGCACATTTGGGTATTTTGCTCCTGAATATTTCATGCATGGCATAGTGGACGAGAAAACTGATGTTTATTCTTTTGGGGTTATACTGTTGGAGCTTATAACTGGGCGTCCAGCTGTGGATGAAAATCAGCTTAGTGTTGTACTATGGGCAAAGCCTTTGCTTGATGATGATAATATGAAGGACCTTGTTGATCCTTGTCTTGGGAACGACTTTGACAGAGAACAGATGGATCGGGTTGTTTTGACAGCATCTCTGTGCGTGGAGCACTCTGCTGTCTTACGTCCCTGCATGAGTCAGGCTGCAATGCTGCTAAGGAATGATGACTATGCAAGGGAAACTACAAATGCAAGCCGGAGGGGTTCTTTCCTTAGAACATACTCACAAGAGCTTCTGGATGCACAAGAATACAACTCAACCAAGTATCTAAATGATCTCAATCAACACAAGAAGATTGCCCTGGGATCTTGA 1461 0.4223 MANGGDMASHNVGCLCDSKMDSVNNTKTVPANDDSLVKHKKRSFPFRSSTSAQDLRHFELEKEKEDVSSPRGVLEVCYRDFDSSLQSSEMENRCSMSHRAQISWSKYFKNLKKRSMKRLASFPSHGAPTVPKGKSKSSRENPVLTNNAYKFRSSLANFRLSDLRNATNHFSNEYLIGRGGYSEVYWGRLKDGSLVAIKRLTKGTPDERTASFLSELGIIAHVDHPNIAKLIGCDVGGMHLVFQLSPLGSLGSLLHGPSKNKLDWSKRYNIALGIANGLLYLHECCHRRIIHRDIKSENILLTKSFEPQICDFGMAKWLPRQLSHHNVSKFEGTFGYFAPEYFMHGIVDEKTDVYSFGVILLELITGRPAVDENQLSVVLWAKPLLDDDNMKDLVDPCLGNDFDREQMDRVVLTASLCVEHSAVLRPCMSQAAMLLRNDDYARETTNASRRGSFLRTYSQELLDAQEYNSTKYLNDLNQHKKIALGS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0167 486 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 246 449 - -
Alju01g0167 486 Pfam Protein kinase domain 172 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0167 486 ProSitePatterns Protein kinases ATP-binding region signature. 176 198 IPR017441 GO:0005524
Alju01g0167 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Alju01g0167 486 PANTHER OS08G0249100 PROTEIN 41 479 IPR046958 -
Alju01g0167 486 ProSiteProfiles Protein kinase domain profile. 170 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0167 486 SUPERFAMILY Protein kinase-like (PK-like) 151 435 IPR011009 -
Alju01g0167 486 Gene3D Transferase(Phosphotransferase) domain 1 246 455 - -
Alju01g0167 486 SMART serkin_6 170 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0167 486 MobiDBLite consensus disorder prediction 120 143 - -
Alju01g0167 486 Gene3D Phosphorylase Kinase; domain 1 131 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0167 Alju-ChrAlju01 1310728 1313883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0167 131 486 Trihelix Transcription Factor Family AT5G38560 39.674 7.34e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Alju01g0167 Pkinase 1e-39 CL0016