Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0150 ATGGGGTGTGTGATTAGTCGGGAAGTGTCATCGGGAATAATCTCTGAGGTGAAAGAGGAGAAGAATTTGAGTGGCGAATCGAGGAGGAAGGTAGATGAAACGTCGTCTCAGAGCGTGGGAGAGGCTCAGAACGGTGGAAAACGAAAGGAAGACAAGGGTGGTAGTGATGAAGGGATCCAGGCCCAACGGCCCAGGGGTGAAAGGAGAAGATCAAAGCCAAACCCAAGGCTAAGTAATCCTCCCAAACATGTGCTAGGAGAGCAAGTAGCAGCTGGATGGCCGCCCTGGCTTACGGCTGTTTGCGGTGAAGCGCTTAGTGGATGGATTCCCCGAAAGGCTGACACATTTGAGAAAATTGACAAGATTGGCCAAGGAACGTATAGCAACGTGTACAAGGCTAAAGATATGTTGACGGGTAAGATTGTTGCTCTTAAGAAGGTTCGATTCGACAATTTGGAGCCTGAGAGTGTAAAGTTCATGGCTAGAGAAATTCTAATTCTCAGAAGATTGGATCACCCCAATGTTGTAAAGTTGGAAGGCTTAGTTACATCAAGGATGTCATGTAGTCTGTATCTGGTATTTGATTACATGGTGCATGATTTAGCTGGACTTGCTGCAAGCCCAGGAATCAAGTTCACAGAGCCTCAGGTCAAATGTTACATGCATCAACTACTTTCTGGACTTGAGCATTGTCATAAGCGGCACATACTTCACCGTGATATTAAAGGATCAAATCTTCTAATTGACGATAGGGGAGTACTTAAGATTGCTGACTTCGGACTGGCTTCTTTCTTTGATCCAAACCACAAACACCCCATGACTAGTCGTGTGGTTACACTTTGGTATCGGCCTCCTGAGTTGCTTCTTGGTGCCACGGATTATGGTGTGGGTATTGATCTTTGGAGTGCAGGTTGTATTTTAGGGGAGTTATTGGCTGGGAAGCCAATTATGCCTGGTCGTACAGAGGTAGAGCAACTGCATAAGATATACAAACTATGTGGCTCACCTTCTGATGAGTATTGGAAGAAGTCAAAGTTGCCTCACGCTACCTTATTTAAACCTCGAGAGCCATACAAGAGATGCATAAGAGAGACGTTTAAAGATTTTCCACCTTCAGCACTGCCCCTTATCGACATGCTTCTTGCTATTGATCCAGCAGAAAGGAAGACAGCCCCTGATGCATTAAATAGTGAGTTCTTCACAACAGAACCGTTTGCTTGCGATCCTTCTAGTCTTCCAAAATATCCCCCAAGCAAGGAAATGGATGCTAAACGACGGGATGATGAAGCAAGGAGATTAAGAGCTGCAAGCAAAGCTCAGGTTGATGGTACAAAGAAAACACGAGCACGGGAACGTGGTGCTAAAGCATTTCCTGCCCCTGAAGCCAATGCTGAGCTTCAGTCTAATATTGATAGAAGGCGGCTAATCAGTCACGCTAATGCCAAGAGCAAGAGTGAAAAGTTTCCTCCGCCGCATCAAGATGGACAACTTGGGTATCCTTTGGGAGCTTCGAATCATATAGATCCTGACATTGTTCCTCCTGATGTCACCTTCAGTTCAACTTCATTTACTTATTCAAAGGAGCCGTTCCAAGCTTGGTCAGGTCCCATAGGTAATACTGCTGCCATTGATGCACCAAAGAAGAAGAAACTCACTGCAGCTGATACATTGGATTTATCAAAACCACACAGAGTTTACACCAAGGATAAGATTAAAGGAAAGAAAATCAAAGCCTAG 1737 0.4508 MGCVISREVSSGIISEVKEEKNLSGESRRKVDETSSQSVGEAQNGGKRKEDKGGSDEGIQAQRPRGERRRSKPNPRLSNPPKHVLGEQVAAGWPPWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFDYMVHDLAGLAASPGIKFTEPQVKCYMHQLLSGLEHCHKRHILHRDIKGSNLLIDDRGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPHATLFKPREPYKRCIRETFKDFPPSALPLIDMLLAIDPAERKTAPDALNSEFFTTEPFACDPSSLPKYPPSKEMDAKRRDDEARRLRAASKAQVDGTKKTRARERGAKAFPAPEANAELQSNIDRRRLISHANAKSKSEKFPPPHQDGQLGYPLGASNHIDPDIVPPDVTFSSTSFTYSKEPFQAWSGPIGNTAAIDAPKKKKLTAADTLDLSKPHRVYTKDKIKGKKIKA 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0150 578 Pfam Protein kinase domain 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0150 578 CDD STKc_CDK9_like 116 400 - -
Alju01g0150 578 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Alju01g0150 578 MobiDBLite consensus disorder prediction 418 455 - -
Alju01g0150 578 Gene3D Phosphorylase Kinase; domain 1 103 198 - -
Alju01g0150 578 ProSiteProfiles Protein kinase domain profile. 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0150 578 SMART serkin_6 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0150 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Alju01g0150 578 MobiDBLite consensus disorder prediction 17 85 - -
Alju01g0150 578 FunFam probable serine/threonine-protein kinase At1g54610 103 198 - -
Alju01g0150 578 Gene3D Transferase(Phosphotransferase) domain 1 199 440 - -
Alju01g0150 578 MobiDBLite consensus disorder prediction 17 35 - -
Alju01g0150 578 PANTHER CELL DIVISION PROTEIN KINASE 114 404 - -
Alju01g0150 578 MobiDBLite consensus disorder prediction 408 473 - -
Alju01g0150 578 MobiDBLite consensus disorder prediction 44 74 - -
Alju01g0150 578 SUPERFAMILY Protein kinase-like (PK-like) 111 406 IPR011009 -
Alju01g0150 578 FunFam probable serine/threonine-protein kinase At1g54610 199 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0150 Alju-ChrAlju01 1171953 1175610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0150 108 440 Core Cell Cycle Gene Families AT5G10270 52.149 7.02e-122 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Alju01g0150 Pkinase 1.9e-66 CL0016