Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0120 ATGAAGCATAAGCACGAGAAGAAGAAATATGTTCTCAAGAAGATCCGCCTGGCCCGCCAAACTGAGAGATCTCGTAGATCTGCTCACCAGGAGATGGAGCTAATCTCTAAATTCAGAAGTCCATTCATTGTGGAGTATAAAGATTCATGGGTAGAGAAGGGTTGCTATGTGTGCATTATCATAGGTTACTGTGAGGGTGGAGATATGGCAGAAGCCATAAAAAAAGCAAATGGCATTCTTTTTCCAGAGGAGAAACTTTGCAAGTGGCTTGTTCAACTTCTTATGGCACTTGACTACTTACACATGAACCATATACTTCATCGGGATGTCAAGTGTTCAAATATATTTTTGACAAAAGATCAAGACATACGCCTTGGTGATTTTGGGCTTGCCAAAATGTTGACTTCAGATGATCTTGCTTCTTCTGTTGTGGGAACACCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATTCCATATGGTTCTAAATCAGATATTTGGTCTTTGGGATGTTGTATATATGAAATGACAGCACATAAGCCTGCTTTTAAAGCATTTGATATACAAGCTCTGATAAACAAGATTAACAAGTCCATAGTGGCCCCACTACCAACAAAGTATTCTGGTGCATTTCGAGGACTTGTTAAAAGCATGCTGCGGAAAAATCCAGAGCTTAGACCTAGTGCTGCGGAGCTACTTGGGCACCCTCATCTTCAGCCTTATGCTCTCAAGATCCATCTTAAAATCAATAACCCCAGACGAAGTACACTCCCAGCCAATTGGCCAGACTCCAAATACGTGAAGAAAACTAGATTTGTGGAGCCAGGCGATTATCTTACTTCCACCTACAGGGCTAAACGGAACTCTTTTAAAAATGACCGGACTTTGAATCCTAGCATATCTGGAGCTGAGCAAGATTCTGTATGCTCTACCCTAGAAATAGATTGTGCTACAGATCATTTGAATCACCGGTTAGCTGAACTGTGCATTGAGGATAGCCCTGAAGTGAACAAAATCCGTAAGCCAGGAGTTTCCAGGAGTTCAAGCATTTCAAGAACTCCAAGAGTGACATCATCAAAAGCTTCTGCCAGCCCTAAGAAACAAATGGAGTTTTCAAAGAATCGTGAGCTGCATCCTATTTCACGGAATACCAGAAAATCTATCCATACAGCTCGTAGAGCATCATTTCCGTTGCCAAAACGAGGTGCTGTTCTTGGCTATGAAAAATCACCTCATATTTCAGTCAACTCTCCCCGAATTGACAGGATAGCTGAATTCCCATTGGCATCATTTGAGGGTCCACTGTTTCCCGTTAATAGAACGTCATCAACTTCTGCACAGGGTTCCTCAGTCTCCCCGCCTTGTGATGATCGTTCAATCATGAAAGATAAATGCACTGTTCAGGTATCTGATAGAACTGCTGTCAGGGCTACTTTGACGGATGCTTTGCAGAGAACCAAATGCAACGTGTGTCAGGAAGATGAGGTGAAAAGTGGGTCCTCTGATCAAAATGCAACTGCTGGCGCATCAAGCCATACCTCTTCAGACTGGCACCGGCGGCATTTTGACACTTCATCATACCAACAAAGAGCTGAAGCCTTGGAAGGGTTACTCGAATTTAGCGCAAGGTTGCTACAACAGGAAAGGTATGAAGAACTTGGGGTCTTGTTGAAACCCTTTGGACCTGGAAAGGTCTCTCCACGTGAAACTGCTATCTGGTTGAGTAAAAGCTTCAAAGAAAACACTCAACCGTGA 1755 0.4325 MKHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKFRSPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGILFPEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTAHKPAFKAFDIQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLGHPHLQPYALKIHLKINNPRRSTLPANWPDSKYVKKTRFVEPGDYLTSTYRAKRNSFKNDRTLNPSISGAEQDSVCSTLEIDCATDHLNHRLAELCIEDSPEVNKIRKPGVSRSSSISRTPRVTSSKASASPKKQMEFSKNRELHPISRNTRKSIHTARRASFPLPKRGAVLGYEKSPHISVNSPRIDRIAEFPLASFEGPLFPVNRTSSTSAQGSSVSPPCDDRSIMKDKCTVQVSDRTAVRATLTDALQRTKCNVCQEDEVKSGSSDQNATAGASSHTSSDWHRRHFDTSSYQQRAEALEGLLEFSARLLQQERYEELGVLLKPFGPGKVSPRETAIWLSKSFKENTQP 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0120 584 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 2 539 - -
Alju01g0120 584 MobiDBLite consensus disorder prediction 493 513 - -
Alju01g0120 584 FunFam Serine/threonine-protein kinase Nek3 66 312 - -
Alju01g0120 584 Pfam Protein kinase domain 2 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0120 584 SMART serkin_6 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0120 584 MobiDBLite consensus disorder prediction 342 368 - -
Alju01g0120 584 CDD STKc_Nek 1 238 - -
Alju01g0120 584 Gene3D Transferase(Phosphotransferase) domain 1 64 253 - -
Alju01g0120 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
Alju01g0120 584 Gene3D Phosphorylase Kinase; domain 1 1 63 - -
Alju01g0120 584 MobiDBLite consensus disorder prediction 493 519 - -
Alju01g0120 584 ProSiteProfiles Protein kinase domain profile. 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0120 584 SUPERFAMILY Protein kinase-like (PK-like) 2 282 IPR011009 -
Alju01g0120 584 MobiDBLite consensus disorder prediction 339 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0120 Alju-ChrAlju01 984779 988829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0120 8 239 MAP Kinase Kinase Kinase AT1G53570 32.068 2.29e-33 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Alju01g0120 Pkinase 3.1e-57 CL0016