Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0116 ATGGAGCTTCCGTCGAACCTGTTACCGGACGAAGCGAGCCCGGAGTGGATGAACAAAGGGGACAACGCCTGGCAGTTAACGGCAGCCACAGTGGTGGGCCTCCAGAGCATACCGGGGCTGGTCATCCTCTACGGAAGCCTCGTCAAGAAGACTTGGGCCGTTAACTCCGCTTTCATGGCCTTCTACGCCTTCGCCGCCGTTCTTCTCTGCTGGGCTTCCTGGGCTTTCCGAATGTCCTTCGGCGACAAACTGTTTTCCTTCGTCGGAAGACCAGGCGTCGCACTGGACGACAAGTTTCTGTTGCAGAAGGCGTTTTTGGGGATGTTTCCTACCGCCACCATGGTGTTCTTCCAGGGCGTGTTCGCCGGAATCACCTTGATCCTAGTGGCCGGAGCATTACTTGGGCGGATGAACTTCCGAGCATGGATGCTGTTTGTGCCGCTGTGGCTCACTTTTTCCTACACCGTCTCTGCATTTAGCATTTGGTCCCCCAATGGGTGGCTTGCAAAGCAGGGCGTCATTGACTTCTCCGGAGGCTTTGTTATTCATCTCTCTGCCGGCGTTGCTGGCTTCACCGCTGCTTATTGGGTGGGTCCGAGATCAAATGAGGATAGAGAAGCGAGTACGCAAACACCAAACAACATGATTATGGTGCTGGCCGGAGCAGGACTTCTGTGGATGGGGTGGAGTGGATTCAACGGTGGAGGTCCGTTCGTGGTGAGCACGGTGGCTTCTCTGGCCGTCTTCAACACGCACGTGTGTGCCGCCACCAGCATCATCGTCTGGGTCTTCCTCGACGCCTTCTACATGGGAAAGCCCACCGTGTTTGGCGCCGTGCAGGGCATGATCACAGGCCTCGTCTGCATCACTCCCGGCGCGGGAGTTGTGCAGGGTTGGGCAGCCATTCTGATGGGATTGATATCTGGGAGCGTAGCCTGGTACACCATGATGATTCTCCATAACAAGGTGAGCTTGTTGAAGAATATTGACGACCCCATGGCGGTCTTCCACACCCACGCCGTCGCCGGCGTTCTTGGGGGCCTTCTCACCGGCTTCTTGGCTGTTCCTAAACTGTGCCGTCTCTTCTACATGGTACCCGACTGGGAAAAGTACATTGGCCTTGCTTATGCGCTTCAGAATGGTTCAACTCGCGCGGGTTTGAAACAGATGGGAATCCAGATTGGAGCCATCGTGTTCGTGGTATGCTTGAACGTCGTCATCACCAGCTTGATTTGCTTGCTGGTGAGGGCCGTAGTACCACTTCGAGTAGAGATCCAAGATTTGGTTGTGGGCGACAAGGCAGTCCATGGAGAAGATGCTTTTGCGTTGTGGAGTGCTGAGGGAGGAAGAATTCAGAATCTAAAGCGCAATCAAGTTTTTGATACCCAACATTACTCATCTTCTGCCTCCAAGTCAATGAGCACAATTCAAATGGCATGA 1440 0.5444 MELPSNLLPDEASPEWMNKGDNAWQLTAATVVGLQSIPGLVILYGSLVKKTWAVNSAFMAFYAFAAVLLCWASWAFRMSFGDKLFSFVGRPGVALDDKFLLQKAFLGMFPTATMVFFQGVFAGITLILVAGALLGRMNFRAWMLFVPLWLTFSYTVSAFSIWSPNGWLAKQGVIDFSGGFVIHLSAGVAGFTAAYWVGPRSNEDREASTQTPNNMIMVLAGAGLLWMGWSGFNGGGPFVVSTVASLAVFNTHVCAATSIIVWVFLDAFYMGKPTVFGAVQGMITGLVCITPGAGVVQGWAAILMGLISGSVAWYTMMILHNKVSLLKNIDDPMAVFHTHAVAGVLGGLLTGFLAVPKLCRLFYMVPDWEKYIGLAYALQNGSTRAGLKQMGIQIGAIVFVVCLNVVITSLICLLVRAVVPLRVEIQDLVVGDKAVHGEDAFALWSAEGGRIQNLKRNQVFDTQHYSSSASKSMSTIQMA 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0116 479 FunFam Ammonium transporter 6 444 - -
Alju01g0116 479 Gene3D Ammonium transporter AmtB like domains 7 458 IPR029020 -
Alju01g0116 479 SUPERFAMILY Ammonium transporter 16 423 - -
Alju01g0116 479 ProSitePatterns Ammonium transporters signature. 175 200 IPR018047 GO:0008519|GO:0016020|GO:0072488
Alju01g0116 479 PANTHER AMMONIUM TRANSPORTER MEP2 4 447 IPR001905 GO:0008519|GO:0016020|GO:0072488
Alju01g0116 479 PRINTS Rhesus blood group protein signature 216 234 IPR002229 GO:0005886
Alju01g0116 479 PRINTS Rhesus blood group protein signature 302 320 IPR002229 GO:0005886
Alju01g0116 479 PRINTS Rhesus blood group protein signature 118 134 IPR002229 GO:0005886
Alju01g0116 479 PRINTS Rhesus blood group protein signature 340 356 IPR002229 GO:0005886
Alju01g0116 479 PRINTS Rhesus blood group protein signature 247 269 IPR002229 GO:0005886
Alju01g0116 479 Pfam Ammonium Transporter Family 23 440 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0116 Alju-ChrAlju01 957402 959056 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0116 112 470 Inorganic Solute Cotransporters AT2G38290 52.368 2.00e-120 355