Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0113 ATGACATTGTCCAGCTCTGCTTCATGGAAGGTGGAGGAGGATGAAGATGAATGCGTGGTGTCATTAGAGAACTCTCAAATTTATTCTATGGAAGAAGATGACAACGTCATGTTGCCGGAGGAGATGGGTCCAAAAAAATCAGACACCAATCGAATCTCAGAAAGGGAAGCGGGAAACAATATGGATAGAGTGTTTTCAGTGGAGGAAATTTCTGAACAGTTTTGGTCGTCGCCGATACCCACCGTGAAGGATGAATCCTCCTCCGGGATGAATCGCAGTGCTTCCGAATGGGCCTTCCAACGATTTCTCAAAGAAGCTTCTGCAGCTTCCCATGCTTCTCATCCTTCTTCTTCTTCCTGCAATCCTGAGAAAAACGACGACTCTAGCCTTGAGATTAAGGAGCAGCCCAAACCCAAACAGGAACTCACGGCGACATCCATTCCTAAGAATGCTGCTGTCTTCTCCAATGCACCTTCTCCAAGCATCCCTGGTGATTCCGAGCAGTACCAGGCTATCCTCAAGAGCAAACTAAATCTCGCTTGCGCTGCGGTCGCCTTAACTCGGGGTTCTTTAGCCAAGTCCCAAGATCCAGCCACTTTACCTAATGGCGTATCAAAGGCTAATAAAACTTATCAAGCTAGATCTCCTGCTACTTTGGAAGAACATGGTCCATCTAATATACATGATAAAGATGCGAAAGGGCCAGTTGCAATTCCTTCATTACCTGCCGCTCAAAAGAAACTGGCAGTTGCAACCAAGCCTACAACCAGTGGATCATCGAGGGATCAGTCTGATGATGAGGAAGCCGAAGAAGAGACTGACGTGACTGGAAATATGGACCCTGCAGATGCAAAACGAGTAAGGAGGATGCTTTCCAATAGGGAGTCGGCCAGGCGCTCGAGAAGAAGAAAGCAGGCTCATTTAATTGAGCTTGAAACACAGGTTGCACAATTAAAAGTAGAAAACTCATCATTGTTAAAGCGTCTTGCTGATGTAAGCCAAAAGTACAATGAAGCTGCTGTTGACAACAGGGTCCTGAAAGCTGATGTCGAAACATTAAGAGCAAAGGTAAAGATGGCCGAAGAGACTGTGAAAAGAATAACTGGGTTAAACCCAATGTTCAATGCCATGTCTGAGATATCATCGATAGGCCTGCCATCATTTGATGGGAGCCCTTCCGACGCATCAGATGCAGCTGTACCTGTGCAAGATGACCCAAGTCATAACTTCTGTCAACCCACTTCTAATAATTCTTTGTCCAAGCCTGATTCAAGAGTCAACAATGGACTTGGAGAAATTTCTTCCATGAAAAATGTGCAGCAGAACCCTGCAGCTATGGTAACTGGAAACAAGATGGGGCGAACAGCTTCCCTGCAGCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATCCGCGGTGGTGCAGATTCTTGTGGTCCGCCTGGCAATGGAGAGCAGTAA 1461 0.4661 MTLSSSASWKVEEDEDECVVSLENSQIYSMEEDDNVMLPEEMGPKKSDTNRISEREAGNNMDRVFSVEEISEQFWSSPIPTVKDESSSGMNRSASEWAFQRFLKEASAASHASHPSSSSCNPEKNDDSSLEIKEQPKPKQELTATSIPKNAAVFSNAPSPSIPGDSEQYQAILKSKLNLACAAVALTRGSLAKSQDPATLPNGVSKANKTYQARSPATLEEHGPSNIHDKDAKGPVAIPSLPAAQKKLAVATKPTTSGSSRDQSDDEEAEEETDVTGNMDPADAKRVRRMLSNRESARRSRRRKQAHLIELETQVAQLKVENSSLLKRLADVSQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFNAMSEISSIGLPSFDGSPSDASDAAVPVQDDPSHNFCQPTSNNSLSKPDSRVNNGLGEISSMKNVQQNPAAMVTGNKMGRTASLQRVASLEHLQKRIRGGADSCGPPGNGEQ 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0113 486 Coils Coil 301 335 - -
Alju01g0113 486 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 338 IPR004827 GO:0003700|GO:0006355
Alju01g0113 486 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Alju01g0113 486 MobiDBLite consensus disorder prediction 278 294 - -
Alju01g0113 486 MobiDBLite consensus disorder prediction 139 166 - -
Alju01g0113 486 MobiDBLite consensus disorder prediction 38 62 - -
Alju01g0113 486 Coils Coil 343 363 - -
Alju01g0113 486 CDD bZIP_plant_GBF1 286 337 IPR045314 GO:0003700|GO:0006355
Alju01g0113 486 MobiDBLite consensus disorder prediction 407 430 - -
Alju01g0113 486 MobiDBLite consensus disorder prediction 190 303 - -
Alju01g0113 486 SUPERFAMILY Leucine zipper domain 285 336 IPR046347 GO:0003700|GO:0006355
Alju01g0113 486 MobiDBLite consensus disorder prediction 387 430 - -
Alju01g0113 486 MobiDBLite consensus disorder prediction 192 215 - -
Alju01g0113 486 Gene3D - 284 340 - -
Alju01g0113 486 Pfam Basic leucine-zipper C terminal 352 475 IPR020983 -
Alju01g0113 486 MobiDBLite consensus disorder prediction 30 63 - -
Alju01g0113 486 FunFam BZIP transcription factor 283 334 - -
Alju01g0113 486 MobiDBLite consensus disorder prediction 108 166 - -
Alju01g0113 486 PANTHER BASIC LEUCINE ZIPPER 63 61 475 - -
Alju01g0113 486 MobiDBLite consensus disorder prediction 110 125 - -
Alju01g0113 486 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Alju01g0113 486 Pfam bZIP transcription factor 284 336 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0113 Alju-ChrAlju01 931953 940285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0113 61 374 bZIP Transcription Factor Family AT4G02640 41.018 2.32e-49 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju01g0113 bZIP_C 3.5e-44 No_clan