Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0109 ATGGCCTGCAATTCCTCTGAGGGATTGGGTGACGATTTTTTGGAGCAAATCTTGGCTGTACCCCCTTCTGCTTACGCCAACGGTGACACCTCCTCCATGCCTCCAATGGTGCTGCAGCTAGGCTCCGGCGGCGGCAGTACTGCTGCTGGTGGCGCCGGCTTGCGAGAATCCTTAGGCATAGGGATGGGCATGCCTTTGGGCTTGAATTTGGAGCAAGGGTTTCTCGGACAAGATGGTGGCAGAGTACGTTACGGCGATGATGCTGTGGACGGCAACAATGTTGCTAATCACCATCTCCATCTTAATAATCCCAACAATAACACCACCGCCACCTCCTCCTCCACTTCTGCTATTTCTGATAGGGAATCCGTGCGCAGGACACCGGGCTTGTTTTTGCCGTTTGGACCGTTGCATCTTCGGCCGACGACGGTGCCATCCCCACCACCTGCCCCCTCTCAACTCCCCCATCATCAGCAATTTCATAGCCAATCACAAAATCCGGGGCCTGTTGCTATTGGGCCTCAACCACCTGCCATCCGCCCTAGAGTGCGAGCAAGAAGAGGGCAAGCCACTGATCCCCATAGTATTGCTGAACGGTTGCGCCGTGAAAGAATTGCTGATAGAATGAAGGCTTTGCAGGAATTAGTTCCCAGCGCCAACAAGACGGACAGAGCGGCAATGCTTGATGAGATTGTGGATTACGTGAAGTTTCTCAGACTGCAGGTTAAGGTGCTCAGCATGAGTAGACTGGGTGGAGCGGGTGCCGTAGCTCAGCTTGTAGCAGATGTTCCTTTGTCTGCAGTGGAGGCGAGTGAGGGCGTTGACGGCGGAGGGAATCAGGCAGCCTGGGAGAAGTGGTCGAATGATGGCACAGAACAAGAGGTTGCCAAACTGATGGAAGAGGATGTGGGAGCTGCCATGCAATTCCTTCAATCCAAGGCACTTTGCATCATGCCCATTTCTCTCGCTTCTGCCATTTTTCGTACGTCCCTCTCAGACACCAAGCCCGAACCAAACAGCCATTCCTAG 1029 0.5394 MACNSSEGLGDDFLEQILAVPPSAYANGDTSSMPPMVLQLGSGGGSTAAGGAGLRESLGIGMGMPLGLNLEQGFLGQDGGRVRYGDDAVDGNNVANHHLHLNNPNNNTTATSSSTSAISDRESVRRTPGLFLPFGPLHLRPTTVPSPPPAPSQLPHHQQFHSQSQNPGPVAIGPQPPAIRPRVRARRGQATDPHSIAERLRRERIADRMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSAVEASEGVDGGGNQAAWEKWSNDGTEQEVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRTSLSDTKPEPNSHS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0109 342 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 58 324 - -
Alju01g0109 342 MobiDBLite consensus disorder prediction 142 193 - -
Alju01g0109 342 SMART finulus 195 244 IPR011598 GO:0046983
Alju01g0109 342 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 187 248 IPR036638 GO:0046983
Alju01g0109 342 Gene3D - 184 246 IPR036638 GO:0046983
Alju01g0109 342 MobiDBLite consensus disorder prediction 155 169 - -
Alju01g0109 342 MobiDBLite consensus disorder prediction 96 122 - -
Alju01g0109 342 Pfam Helix-loop-helix DNA-binding domain 194 238 IPR011598 GO:0046983
Alju01g0109 342 MobiDBLite consensus disorder prediction 95 123 - -
Alju01g0109 342 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 189 238 IPR011598 GO:0046983
Alju01g0109 342 FunFam Transcription factor bHLH66 186 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0109 Alju-ChrAlju01 905345 909685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0109 160 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 72.973 2.68e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju01g0109 HLH 4.4e-08 No_clan