Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0105 ATGAGGAGCAAAAGGGTCGAGGTGGAGGAGGTAGTGGTTACGGGGATGCTCGTGTTGTGCCTGCCGTCGTGCTTCTTCCAAATCGAAAAGCAACTCGTCACTCAATCTGACTTTCCCCCTCCGATGGCCGAAGAATCCAAGGCCAAAGGTAATGCCGCTTTCTCTTCCGGTGATTTCGACGCCGCCATCCGTCATTTTTCCGACGCCATCTCTCTCTCCCCCAATAACCATGTCCTCTACTCCAATCGATCGGCTGCTTATGCCTCCCTTCACAAATACTCTGAAGCGCTATCCGATGCCAAGAAGACTGTCGAGCTCAGGCCCGATTGGTCCAAGGGCTACAGCCGTCTCGGCGCCGCTCATCTCGGACTCGGCCAACACGACGATGCTATTGCTGCTTACAAGAAGGGCCTTGAAATCGACCCCAATAATGAACCACTTAAATCCGGTTTGGTTGATGCCCGGGCTGCGGCTTCTAGGTCCCGTTCGGCGCCCCCCATGGGCAATCCTTTCGGAGACGCTTTCTCTGGACCCGAGATGTGGGCTAGGCTCACTGCCGATCCCACCACCAGGGCATATCTGCAGCAACCTGATTTTGTCAAGATGATGCAGGATATTCAGAAAAATCCCAACAATCTGAACTTGTATATGAAAGACCAAAGAATCATGCAAGCCCTTGGGGTTTTGCTCAACCTCAAGATTCGCACCCCGAACGAGGACACTGATATGCCCGAGTCTTCCCCTTCGCCTCCGCCAGCAGAGAGGAAGAGAGCTGCTGAAGCTGAACAGGAGAAGGAAGAGAAGCGGCCTGAGACCGAGACCGTGCCCATTGAGTTGAGGGAGGAAGAGAAGGAAGCGAAGGATAGGAAAGCTCAGGCTCAGAGGGAAAAGGAGGCAGGCAATGCGGCTTATAAAAAGAAGGATTTTGATACGGCAATCCAGCATTACTCCAAGGCTATGGAATTGGATGATGAAGATATTTCATATCTCACAAACCGTGCTGCTGTTTACTTGGAAATGGGAAAGTTAGAAGAATGCATAAAAGATTGTGACAAGGCTGTAGAAAGGGGAAGAGAATTGAGATCAGACTTTAAGATGATTGCAAGAGCTTTGACAAGGAAGGGAACAGCCCTGGTGAAAATGGCAAAATGCTCAAAGGATTATGAACCCGCCATTGAGACTTTCCAAAAGGCACTTACAGAGCATCGCAACCCTGACACCTTGAAGAAATTGAATGATGCTGAAAAGGCTAAGAAAGAACTTGAACAGCTAGAATACTTTGATCCAAAATTGGCTGATGAGGAGCGTGAAAAAGGTAATGATTTCTTTAAGCAACAAAATTATCCCGAAGCTGTGAAGCATTACACCGAGTCTTTAAGAAGGAACCCTAAGGATCCTAGGACTTACAGTAACAGAGCTGCATGCTACACAAAACTTGGGGCAATGCCTGAGGGTTTGAAGGATGCAGACAAATGCATTGAGCTGGATCCAACTTTTGTAAAGGGTTATACTAGAAAAGGTGCTATACAGTTTTTCATGAAAGAATATGACAAAGCTTTGGAAACGTACCAGGAGGGGTTGAAACATGATTCAAACAATCAGGAGTTGCTTGATGGCATAAGAAGATGTGTAGAACAAATTAATAAGGCCAGCCGTGGGGATATAAGTCCTGAGGAGTTGAAGGAGAGACAGGCCAAGGCAATGCAGGATCCTGAGATCCAGAACATCCTCCAAGACCCTATTATGAGACAGGTATTGGTTGATTTTCAGGAAAATCCCAAGGCTGCCCAGGAGCATACGAAGAATCCTATGGTGATGAACAAGATTCAGAAGCTGGTCAGTGCTGGAATTGTCCAACTTAGATAA 1866 0.4764 MRSKRVEVEEVVVTGMLVLCLPSCFFQIEKQLVTQSDFPPPMAEESKAKGNAAFSSGDFDAAIRHFSDAISLSPNNHVLYSNRSAAYASLHKYSEALSDAKKTVELRPDWSKGYSRLGAAHLGLGQHDDAIAAYKKGLEIDPNNEPLKSGLVDARAAASRSRSAPPMGNPFGDAFSGPEMWARLTADPTTRAYLQQPDFVKMMQDIQKNPNNLNLYMKDQRIMQALGVLLNLKIRTPNEDTDMPESSPSPPPAERKRAAEAEQEKEEKRPETETVPIELREEEKEAKDRKAQAQREKEAGNAAYKKKDFDTAIQHYSKAMELDDEDISYLTNRAAVYLEMGKLEECIKDCDKAVERGRELRSDFKMIARALTRKGTALVKMAKCSKDYEPAIETFQKALTEHRNPDTLKKLNDAEKAKKELEQLEYFDPKLADEEREKGNDFFKQQNYPEAVKHYTESLRRNPKDPRTYSNRAACYTKLGAMPEGLKDADKCIELDPTFVKGYTRKGAIQFFMKEYDKALETYQEGLKHDSNNQELLDGIRRCVEQINKASRGDISPEELKERQAKAMQDPEIQNILQDPIMRQVLVDFQENPKAAQEHTKNPMVMNKIQKLVSAGIVQLR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0105 621 FunFam Stress-induced phosphoprotein 1 41 157 - -
Alju01g0105 621 SUPERFAMILY TPR-like 38 538 IPR011990 GO:0005515
Alju01g0105 621 FunFam Stress-induced phosphoprotein 1 290 424 - -
Alju01g0105 621 FunFam Stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing) 553 621 - -
Alju01g0105 621 ProSiteProfiles TPR repeat region circular profile. 111 144 - -
Alju01g0105 621 MobiDBLite consensus disorder prediction 255 302 - -
Alju01g0105 621 ProSiteProfiles TPR repeat profile. 111 144 IPR019734 GO:0005515
Alju01g0105 621 Gene3D - 168 234 - -
Alju01g0105 621 Pfam Tetratricopeptide repeat 112 144 IPR001440 GO:0005515
Alju01g0105 621 SMART tpr_5 43 76 IPR019734 GO:0005515
Alju01g0105 621 SMART tpr_5 77 110 IPR019734 GO:0005515
Alju01g0105 621 SMART tpr_5 466 499 IPR019734 GO:0005515
Alju01g0105 621 SMART tpr_5 368 405 IPR019734 GO:0005515
Alju01g0105 621 SMART tpr_5 111 144 IPR019734 GO:0005515
Alju01g0105 621 SMART tpr_5 432 465 IPR019734 GO:0005515
Alju01g0105 621 SMART tpr_5 500 533 IPR019734 GO:0005515
Alju01g0105 621 SMART tpr_5 327 360 IPR019734 GO:0005515
Alju01g0105 621 SMART tpr_5 293 326 IPR019734 GO:0005515
Alju01g0105 621 ProSiteProfiles TPR repeat profile. 500 533 IPR019734 GO:0005515
Alju01g0105 621 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Alju01g0105 621 FunFam Putative stress-induced-phosphoprotein 1 167 235 - -
Alju01g0105 621 PANTHER TPR REPEAT CONTAINING PROTEIN 43 593 - -
Alju01g0105 621 SMART CBM 570 609 IPR006636 -
Alju01g0105 621 SMART CBM 177 216 IPR006636 -
Alju01g0105 621 ProSiteProfiles TPR repeat profile. 293 326 IPR019734 GO:0005515
Alju01g0105 621 Pfam Tetratricopeptide repeat 49 76 IPR019734 GO:0005515
Alju01g0105 621 ProSiteProfiles TPR repeat profile. 432 465 IPR019734 GO:0005515
Alju01g0105 621 Gene3D Tetratricopeptide repeat domain 42 156 IPR011990 GO:0005515
Alju01g0105 621 Pfam TPR repeat 300 341 - -
Alju01g0105 621 Pfam TPR repeat 439 480 - -
Alju01g0105 621 Coils Coil 277 303 - -
Alju01g0105 621 Pfam STI1 domain 178 231 IPR041243 -
Alju01g0105 621 Pfam STI1 domain 562 613 IPR041243 -
Alju01g0105 621 MobiDBLite consensus disorder prediction 235 302 - -
Alju01g0105 621 Gene3D Tetratricopeptide repeat domain 290 424 IPR011990 GO:0005515
Alju01g0105 621 Gene3D - 552 621 - -
Alju01g0105 621 FunFam hsp70-Hsp90 organizing protein 3-like 431 545 - -
Alju01g0105 621 Gene3D Tetratricopeptide repeat domain 431 551 IPR011990 GO:0005515
Alju01g0105 621 ProSiteProfiles TPR repeat profile. 43 76 IPR019734 GO:0005515
Alju01g0105 621 Coils Coil 404 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0105 Alju-ChrAlju01 892735 896544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0105 431 527 U-box Gene Family AT3G07370 28.866 2.81e-07 50.8