Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0087 ATGATGAATCCACATCTCCACCTGCAGGGAACTCCAGTGAATATCATTGTAGGTTCTCATGTCTGGATTGAAGATCCAGATGTTGCTTGGATTGATGGACAGGTAACAAAAATCAATGGAAAGGATGCTGAAATTGAAACTACCAATGGAAAAAAGGTTTCTGCAAAATTATCAAAAATATATCCCAAAGATATGGAGGCTCCTGCCGGTGGAGTGGATGATATGACAAAGCTGTCTTATTTGCATGAGCCTGGAGTCTTGCAGAACATAAAATCTAGATATGAATTGAATGAAATATATACCTATACTGGAAATATTCTTATTGCCATAAATCCATTCCAAAGACTACCTCATCTTTATGATTCTCACATGATGCAACAGTACAAGGGAGCTCCTTTCGGAGAACTAAGTCCTCATGTATTTGCAGTAGCTGATGTTGCATATAGGGCAATGATTAACGAAGGAAAAAGTAATTCCATTTTGGTCAGTGGGGAAAGTGGAGCCGGTAAAACTGAAACTACAAAAATGCTTATGCGATATTTAGCTTACTTAGGTGGTAGGGCTGTCACAGAAGGAAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACTGTTAGGAACAACAATTCGAGCCGTTTTGGTAAATTTGTTGAGATCCAATTTGACAAGAGTGGAAGAATCTCAGGAGCAGCCATTCGAACTTACCTTCTGGAGAGGTCTCGGGTCTGCCAAATTAATGATCCTGAACGCAACTACCACTGCTTTTATCTCCTTTGTGCTGCACCGCACGAGGAAATTGAGAAATACAAACTAGATCATCCTAGATCATTTCACTACCTGAACCAATCAAATTGTTATGAACTGGCTGATGTGAGTGATGCTTGTGAATATCTTGCTACCCGCAGAGCTATGGATGTTGTTGGAATAAGCCAGAAAGACCAGGAGGCAATTTTCCGAGTTGTTGCTGCAATTCTTCATCTTGGTAATATTGTTTTTTCCAAAGGAAAAGAAGCTGACTCATCAGTTCTGAAAGATGACAAAGCAAAATTCCACTTGAAAACAACTGCAGAGCTTCTCATGTGTGATGCTAATGCCTTGCAAGATGCATTGTGCAAACGTGTCATGGTCACCCCTGAAGAAGTTATAAAGCGGAGCCTTGACCCCCAAAGTGCGGCAATAAGTAGAGATGGCTTTGCAAAAACAATTTATTCTCGGCTATTTGACTGGTTGGTGGACAAGATTAATAGTTCAATTGGACAAGATCCGAATTCCAAATGTTTGATCGGGGTCCTTGATATCTATGGTTTTGAAAGCTTTAAAACTAACAGTTTTGAGCAGTTCTGCATCAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGGCAAAATCTCAGACCGCATTAAGCATTTCAGTTTCTTGCATATATTTTATTTCCGAATTTGACAAGTTTGATGATGATTTGCAGCACGTGTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAGATTGATTGGAGCTACATTGAATTTGTTGATAATCAAGATGTTTTAGACCTTATTGAAAAGAAACCTGGAGGAATTGTCGCTCTCCTTGATGAAGCTTGCATGTTTCCCAAGTCAACATACGAAACATTTGCAAATAAGCTTTATCAAACATTTAAGAATCACAAGCGTTTTATAAAGCCAAAATTGTCTCGAACAGATTTTACCATTGCTCATTATGCTGGGGAGGTCTTGTACCAGTCTGACCAGTTTTTAGATAAAAATAAAGATTATGTGGTTGCTGAACATCAAGATTTGTTGAGCGCTTCCAAATGTCCTTTCGTAGCAGGCCTTTTTCCTCCACTTCCAGAAGAGACATCTAAATCATCAAAATTTTCTTCAATAGCTTCTCGTTTTAAGCTACAACTACAGCAACTAATGGACACATTGAACTCGACAGAACCTCATTATGTCAGATGTATAAAACCAAACAGTGTCCTTAAGCCCGCAATATTTGAGAATGTCAACATTATGCAACAACTTCGCTGTGGTGGCGTTCTAGAGGCAATCAGAATTAGTTGCGCCGGCTACCCTACTCGCCGTCTTTTCTTTGAATTTGCTCACAGATTTGGAATCCTTGCCCCAGAGGTCGTGGATGGAAATTCTGATGAAAAGGTTGTTTGCCAGAAGATTCTGGAGAAAGTGGGGCTTAAAGGATATCAGATTGGGAAAACAAAGATATTCCTGAGAGCAGGTCAGATGGCTGAACTAGATGCACGGAGGGCTCAAGTTCTCAGCCGGGCAGCCAAAATTATCCAACGGCGCATACGGACCCATCAAGCTCGTAATCATTATCTTGCATTGCTTAGAACTACTGCATTCATGCAGTCTCTATGTAGAGGAAGACTGGCATGTAAACATTATGAAAACATGAGAAGGGAGGCCGCTGCAAAGAAAATTCAGAAAAATTTGCGCAGATATGCAGCTAGAAAATCCTATAAAAGACTACAAGCTTCAGTACATATCTTGCAAACAGGTTTAAGGACAATGGGTGCCCGTAATCAGTTCAGGTTTAGGAAGCGGACTAAAGCTGCTGTCACTATTCAGGCTTGGTGGCGATGCCGGAAGGCTACAGTATATTATAAGAGGCTCAAGAAAAGTACTATAGTTGCACAATGCAGGTGGCGGGGGCGGTTGGCCAGGAGAGAACTTAGGAAACTCAAAATGGCTGCAAGAGAAACTGGTGCGCTTAAGGAAGCAAAGGATAAGCTGGAAAAACGAGTGGAGGAGCTCACTTGGCGTCTGCAATTAGAAAAAAGCTTAAGGACTAACCTAGAAGAAGCCAAAGCACAAGAAGTAGCAAAACTGCAGAACTCCCTACAGGAGATGCAGAACAAGATTGATGAAACCAATGCTTTACTTGTCAAGGAGCGGGGGAATGCAAAGAAAGTTGTAGAAGAAGCGCCTCCTGTCATTAAAGAAACACAAGTTCTAGTGGAAGACACACAAAAGATTGAGTCACTATCAGTGGAAGTTGAGAGTCTGAAGACTTCATTAGAGTCAGAGAAACAAAAAGCTGAAGATTTTGAAAGAAAATACAACGAATCTCAAGCTTTTAGTGAAGAGCAGGGTAAAAAATTAGAGGACACAGAGAAGAAGGTTCGTCAACTCCAGGAATCGTTAACCAGGCTGGAAGAGAAAATTACTAATTTAGAATCAGAGAATCGGGTTCTACGTCAGCAAGCTGTATCCATGGCACCAAATAAGCTCCTTTCAGGACGCTCCAGATCTATTATACAGAGAGGTGCTGAAAGTGGTCAAATAGTCGGAGAAGCGAAGATACCCTTGGATCTTCATAGTTCATCAATTAACCAGAGGGAACGTGCCGAAGTAGATGATAGACCACAAAAATCACTAAATGAGAAACAGCAGGAAAATCAAGAGCTGCTCATCAGATGTATTGTGCAACATGTAGGCTTTGCCGGGAACAGACCTGTTGCTGCATGTATCATATACAAATGTCTCTTGCATTGGAGATCATTTGAAGTTGAGCGCACTAATGTTTTTGATCGTATCATTAATGCCATTGGCGATAAAATTGAGAACCAGGAAAACAATGATGTCTTGGCTTATTGGCTATCCAATGCATCCACACTTCTATTGTTGCTCCAGCGCACACTTAAGGCAAGTGGTGCTGCTGGAATGGCCCCACAACGCCGTCGTTCTTCATCCGCAACCCTATTTGGGAGGATGACACAGAGTTTCCGTGGATCCCCTCAGGGAGTTAATCTCTCCTTAATCCATGGTAGAATAAGCGGTGGAGCAGACACATTGCGACAAGTTGAAGCCAAGTACCCAGCTTTGCTTTTCAAACAGCAGCTTACTGCATATGTAGAAAAAATATATGGAATGATTCGGGATAATCTAAGGAAAGAACTTTCTCCCCCGGTATCGTCGTGCATCCAGGCACCAAGAACATCCAGAGCAGGCCTTGTTAAGGGACAACTTTCAGTTGCAAATACCGAAGCTCAGAAAGCTTTGATGGGTCACTGGCAGAAGATAGTTAATAGCCTTGAGAACTATTCGAATTCTTTGAAAGCAAATCGTGTTCCCTCATTTTTGGTTCGTAAGTTGTTCACTCAAATTTTTTCTTATATCAATGTTCAACTATTCAACAGTCTCCTTTTAAGAAGGGAGTGCTGTTCATTTAGCAATGGAGAATTTGTCAAAGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAGGCGACAGAAGAGTATGCAGGTTCAGCGTGGGATGAGCTGAAACATATCAGGCAGGCGATTGGATTTCTGGTCATACACCAGAAGCCTAAGAAAACACTGGATGAAATAAGCCATGACCTGTGCCCGGTCCTCAGCATCCAGCAGTTATATCGGATCAGCACAATGTACTGGGATGACAAGTATGGCACCCATAGCGTTGCAGTTGATGTCATTGCCAGTATGAAAGTGTTGATGGCTGAAGATTCGAATATCGCTCTTAGTAGTTCTTTCCTGCTGGATGATGATTCAAGCATTCCGTTTTCTGTTGATGATCTGTCAAGGTCGATGGAACAAATAGATATCTCCGATGTTGAGGCCCCACCACTTATTCGTGAGAACTCTGGCTTTAGTTTCTTGTTGCCAAGCCCAAATTAA 4698 0.4136 MMNPHLHLQGTPVNIIVGSHVWIEDPDVAWIDGQVTKINGKDAEIETTNGKKVSAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNIKSRYELNEIYTYTGNILIAINPFQRLPHLYDSHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAVTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPHEEIEKYKLDHPRSFHYLNQSNCYELADVSDACEYLATRRAMDVVGISQKDQEAIFRVVAAILHLGNIVFSKGKEADSSVLKDDKAKFHLKTTAELLMCDANALQDALCKRVMVTPEEVIKRSLDPQSAAISRDGFAKTIYSRLFDWLVDKINSSIGQDPNSKCLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQAKSQTALSISVSCIYFISEFDKFDDDLQHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTYETFANKLYQTFKNHKRFIKPKLSRTDFTIAHYAGEVLYQSDQFLDKNKDYVVAEHQDLLSASKCPFVAGLFPPLPEETSKSSKFSSIASRFKLQLQQLMDTLNSTEPHYVRCIKPNSVLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRLFFEFAHRFGILAPEVVDGNSDEKVVCQKILEKVGLKGYQIGKTKIFLRAGQMAELDARRAQVLSRAAKIIQRRIRTHQARNHYLALLRTTAFMQSLCRGRLACKHYENMRREAAAKKIQKNLRRYAARKSYKRLQASVHILQTGLRTMGARNQFRFRKRTKAAVTIQAWWRCRKATVYYKRLKKSTIVAQCRWRGRLARRELRKLKMAARETGALKEAKDKLEKRVEELTWRLQLEKSLRTNLEEAKAQEVAKLQNSLQEMQNKIDETNALLVKERGNAKKVVEEAPPVIKETQVLVEDTQKIESLSVEVESLKTSLESEKQKAEDFERKYNESQAFSEEQGKKLEDTEKKVRQLQESLTRLEEKITNLESENRVLRQQAVSMAPNKLLSGRSRSIIQRGAESGQIVGEAKIPLDLHSSSINQRERAEVDDRPQKSLNEKQQENQELLIRCIVQHVGFAGNRPVAACIIYKCLLHWRSFEVERTNVFDRIINAIGDKIENQENNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGSPQGVNLSLIHGRISGGADTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLRKELSPPVSSCIQAPRTSRAGLVKGQLSVANTEAQKALMGHWQKIVNSLENYSNSLKANRVPSFLVRKLFTQIFSYINVQLFNSLLLRRECCSFSNGEFVKAGLAELEHWCYKATEEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVAVDVIASMKVLMAEDSNIALSSSFLLDDDSSIPFSVDDLSRSMEQIDISDVEAPPLIRENSGFSFLLPSPN 1565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0087 1565 Pfam IQ calmodulin-binding motif 821 840 IPR000048 GO:0005515
Alju01g0087 1565 Pfam IQ calmodulin-binding motif 892 911 IPR000048 GO:0005515
Alju01g0087 1565 Pfam IQ calmodulin-binding motif 773 791 IPR000048 GO:0005515
Alju01g0087 1565 Pfam IQ calmodulin-binding motif 868 888 IPR000048 GO:0005515
Alju01g0087 1565 CDD MyosinXI_CBD 1147 1531 IPR037975 GO:0007015
Alju01g0087 1565 Gene3D - 822 868 - -
Alju01g0087 1565 Gene3D - 770 821 - -
Alju01g0087 1565 Gene3D - 869 918 - -
Alju01g0087 1565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 821 919 IPR027417 -
Alju01g0087 1565 FunFam Myosin heavy chain 260 315 - -
Alju01g0087 1565 Coils Coil 913 986 - -
Alju01g0087 1565 CDD MYSc_Myo11 84 756 IPR036018 -
Alju01g0087 1565 PRINTS Myosin heavy chain signature 157 182 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju01g0087 1565 PRINTS Myosin heavy chain signature 518 546 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju01g0087 1565 PRINTS Myosin heavy chain signature 437 465 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju01g0087 1565 PRINTS Myosin heavy chain signature 100 119 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju01g0087 1565 PRINTS Myosin heavy chain signature 204 231 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju01g0087 1565 ProSiteProfiles IQ motif profile. 867 894 IPR000048 GO:0005515
Alju01g0087 1565 SMART iq_5 818 840 IPR000048 GO:0005515
Alju01g0087 1565 SMART iq_5 770 792 IPR000048 GO:0005515
Alju01g0087 1565 SMART iq_5 841 863 IPR000048 GO:0005515
Alju01g0087 1565 SMART iq_5 889 911 IPR000048 GO:0005515
Alju01g0087 1565 SMART iq_5 793 815 IPR000048 GO:0005515
Alju01g0087 1565 SMART iq_5 866 888 IPR000048 GO:0005515
Alju01g0087 1565 FunFam unconventional myosin-Va 821 869 - -
Alju01g0087 1565 SMART DIL_2 1383 1490 IPR002710 -
Alju01g0087 1565 MobiDBLite consensus disorder prediction 1033 1057 - -
Alju01g0087 1565 ProSiteProfiles IQ motif profile. 890 919 IPR000048 GO:0005515
Alju01g0087 1565 Gene3D Myosin VI head, motor domain, U50 subdomain 320 453 - -
Alju01g0087 1565 Coils Coil 1011 1038 - -
Alju01g0087 1565 Coils Coil 1046 1087 - -
Alju01g0087 1565 ProSiteProfiles IQ motif profile. 771 799 IPR000048 GO:0005515
Alju01g0087 1565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 821 IPR027417 -
Alju01g0087 1565 SMART MYSc_2a 65 769 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju01g0087 1565 ProSiteProfiles IQ motif profile. 794 823 IPR000048 GO:0005515
Alju01g0087 1565 FunFam Myosin 2 320 433 - -
Alju01g0087 1565 Gene3D - 703 769 - -
Alju01g0087 1565 ProSiteProfiles IQ motif profile. 819 847 IPR000048 GO:0005515
Alju01g0087 1565 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 16 65 IPR004009 GO:0003774|GO:0005524|GO:0016459
Alju01g0087 1565 Gene3D Kinesin motor domain 20 304 IPR036961 -
Alju01g0087 1565 Gene3D Kinesin motor domain 630 702 IPR036961 -
Alju01g0087 1565 Gene3D - 454 624 - -
Alju01g0087 1565 ProSiteProfiles Dilute domain profile. 1196 1508 IPR002710 -
Alju01g0087 1565 FunFam unconventional myosin-Va 870 917 - -
Alju01g0087 1565 Pfam DIL domain 1384 1487 IPR002710 -
Alju01g0087 1565 Pfam Myosin head (motor domain) 500 756 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju01g0087 1565 Pfam Myosin head (motor domain) 72 473 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju01g0087 1565 ProSiteProfiles Myosin motor domain profile. 70 768 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju01g0087 1565 PANTHER MYOSIN 62 473 - -
Alju01g0087 1565 Pfam Myosin N-terminal SH3-like domain 17 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0087 Alju-ChrAlju01 746198 758332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0087 10 1562 Myosins gene family AT1G54560 79.987 0.0 2607