Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0083 ATGCAGTCCTTCTTGTTATTCCACTGTTTCATTGCCCTCTCTCTTGTTTTTGCCGAGGGAGCTCAATCTGCATTTAGTGATGAATTGTCAACACTTCTCTCAATCAAATCCAGTCTCGTTGATCCAATGAAGCACCTGAATGATTGGCAGACCCGTGATGGTTCATGGTCGTCACCCCACTGTAACTGGACTGGGGTTTGGTGCAACTCTAAAGGCTTCGTAGAGAGACTCGACCTCTCCAACATGAACCTTAGTGGTCGTGTTTCAGACCACATTCAAGCACTTTCAAGTCTGTCCTTTTTCAGCATAAGGTGCAACGATTTCGCTTCTTCATTGCCAATATCACTGTCCAATCTCACTTCCTTGAAGAGCTTTGATGTGAGCCAGAACTACTTCATTGGCAGCTTTCCTACGGGTCTTGGGAGTGCCACTGGATTGAGATCAATTAACGCGTCAAGTAATAACTTCTCGGGTTTTCTTCCCGAGGATCTGGGGAATGCAACGTTGCTTGCAAGCATTGATTTTCGTGGGGGCTACCTTGAAGGCTCAATCCCCATTAGTTTCAAGAATTTACAGAAGGTCAAATTTCTTGGGCTCTCAGGGAATAACTTTACGGGGAAGATTCCAGGAGAGCTTGGAGAACTTACTTCTCTAGAGACACTAATTCTTGGGTACAATGCGTTTGAAGGAGAGGTCCCTTCAGAGTTTGGGAACCTCACCAATCTTCAGTACCTAGACTTGGCTGTGGGTAGTCTCAGTGGACAGATTCCACCACAATTGGGGAAGCTGAAAAAGCTTAATACACTATTCTTGTACAGGAACAAGTTTGAAGGAAAGATTCCCCCCGAGATTGGCAGCATTACGTCATTGGAGTATCTGGACCTGTCTGATAACTTGATTTCAGGGAATATCCCTGAGGAAATTGCTGAGCTGAAGAACTTGCAGCTATTAAATGTAATGAGAAACAAACTAACAGGTTTTGTACCAGAAAAGCTTGGGGAGCTGAAGAAACTAAAAGTGCTTGAGCTATGGAAAAATTCTTTACAAGGTCCTTTGCCGGCGAACCTTGGACAGAACTCTCCACTGGAGTGGTTGGACGTGTCTTCTAACTCGTTATCAGGTGAAATTCCTCCAGGTTTGTGTGCTTCCGGAAATCTCACTAAACTGATACTTTTCAGTAATTCCTTCTCTGGTTCCATTCCAAGTGGGATTTCAAATTGTTCTTCTTTGGCACGTGTTCGCATTCATAACAACCATCTATCTGGGACTATTCCAATTGGTTTCGGAAAACTCCCAAATCTTCAAAGGCTGGAATTGGCTAGGAATAACATCACCAGCCAAATTCCAATAGATATCACTTCATCCACTTCACTTTCTTTCATTGATGTATCTTGGAACCACCTTGAATCATCTCTACCTTCTGGAATTCTTTCTATTCCCACCCTTCAAACCTTCATTGCGTCCAACAACGACTTGGGAGGCAATATTCCAGGTGAGTTCCAGGACTGCTTGACTCTCTCTGTGCTGGATCTTTCTAACAACCTTATATCTGGAGAAATCCCAGAAAGCATTGCTTCTTGCCAAAAACTAGTCCATTTGAACCTCGGGAACAACCAGTTCACCGGGGAAATCCCGAAATCAATTGCAAGCATGCCCACCTTAGCCACTCTTGATCTGTCCCACAATACGCTTTCCGGCCGGATACCTGAAAACCTTGGCAGCTCCCCTGCTCTTGAAACCATCAACCTATCCTATAACAAGCTCGAGGGTCCAGTGCCCTCCAATGGGATTTTGATGACCATAAACCCTAATGATCTCGCCAACAATGTCGATCTCTGCGGAGGCATTCTTCCTCCATGTTCTCAGAGCTCAACTCCGGTAAGCCAGCGAAAGAGCTCACACACAAAGCATATCATGGTTGGTTTTATCACAGGAATATCAGTGATTGTGTCACTGGGCATTGCATATATGGGTGGGAGATGGTTGTACAATAAATGGTACTTATACAACAGTTTCGTCCACGATTGGTTCAAAGACAACAGCGAAGAATGGCCTTGGAGATTAGTGGCATTCCAAAGGGTCAGTTTCACAAGCACTGAGATTCTCGCTTGCATTAAGGAACCAAATATTATAGGCATGGGAGGCACTGGGATTGTGTATAAAGCCGAAATTCATAGACCTCAAGCAACAGTCGCAGTGAAGAAACTATGGAGGTCAGGGGCAGACATAGAGGATGGGAATGACGTGTTGAAAGAAGTGAATCTGTTGGGGAGATTGAGGCATAGGAATATTGTGAGGTTGTTGGGGTATGTTCACAACGAAAGGGATGCGATGATGGTGTACGAGTTCATGCCCAATGGGAATCTTGGGACAGCACTCCATGGAGGGCAAGGAGAAAGGTTACTGGTAGATTGGATTTCAAGGTATAACGTAGCTGTTGGAGTTGCCCAAGGCCTCCATTATCTCCACCATGATTGTCACCCCCCAGTTATTCACAGAGACATCAAGTCTAACAATATACTACTCGACGCAAATTTGGAGGCAAGGATAGCTGATTTCGGGTTAGCAAAAATGCTGATCCATAAGAATGAGACTGTTTCAATGGTGGCTGGATCTTATGGGTACATCGCACCAGAATATGGATATACTCTGAAAGTGGACGAGAAAATCGACATATACAGTTACGGGGTAGTGCTTCTGGAGCTCGTAACAGGGAAAAAGCCTTTAGACCTGTCATTCGAAGAATGTGGAGACATAGTTGAATGGGTGAGAAAGAAAAGAAGCAATGGAGGGTTGGAAGAAGCACTAGATCCCACCATAGCGGGGAGGTGCAGGCATGTCCAAGAAGAGATGCTTCTTGTGCTCCGAATTGCACTTCTCTGTACGGCAAAGCTTCCAAAGGAAAGACCATCCATGAGAGACATAGTGATGATGCTGGGAGAGGCAAAACCCAGAAGAAAAAGCACCTCTCCAAATGGAACACACCTCTCCCATCATAAGCCTTCTCTAGCAACTAGTTCCTATCTGTAA 3030 0.4488 MQSFLLFHCFIALSLVFAEGAQSAFSDELSTLLSIKSSLVDPMKHLNDWQTRDGSWSSPHCNWTGVWCNSKGFVERLDLSNMNLSGRVSDHIQALSSLSFFSIRCNDFASSLPISLSNLTSLKSFDVSQNYFIGSFPTGLGSATGLRSINASSNNFSGFLPEDLGNATLLASIDFRGGYLEGSIPISFKNLQKVKFLGLSGNNFTGKIPGELGELTSLETLILGYNAFEGEVPSEFGNLTNLQYLDLAVGSLSGQIPPQLGKLKKLNTLFLYRNKFEGKIPPEIGSITSLEYLDLSDNLISGNIPEEIAELKNLQLLNVMRNKLTGFVPEKLGELKKLKVLELWKNSLQGPLPANLGQNSPLEWLDVSSNSLSGEIPPGLCASGNLTKLILFSNSFSGSIPSGISNCSSLARVRIHNNHLSGTIPIGFGKLPNLQRLELARNNITSQIPIDITSSTSLSFIDVSWNHLESSLPSGILSIPTLQTFIASNNDLGGNIPGEFQDCLTLSVLDLSNNLISGEIPESIASCQKLVHLNLGNNQFTGEIPKSIASMPTLATLDLSHNTLSGRIPENLGSSPALETINLSYNKLEGPVPSNGILMTINPNDLANNVDLCGGILPPCSQSSTPVSQRKSSHTKHIMVGFITGISVIVSLGIAYMGGRWLYNKWYLYNSFVHDWFKDNSEEWPWRLVAFQRVSFTSTEILACIKEPNIIGMGGTGIVYKAEIHRPQATVAVKKLWRSGADIEDGNDVLKEVNLLGRLRHRNIVRLLGYVHNERDAMMVYEFMPNGNLGTALHGGQGERLLVDWISRYNVAVGVAQGLHYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMLIHKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELVTGKKPLDLSFEECGDIVEWVRKKRSNGGLEEALDPTIAGRCRHVQEEMLLVLRIALLCTAKLPKERPSMRDIVMMLGEAKPRRKSTSPNGTHLSHHKPSLATSSYL 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0083 1009 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 364 624 - -
Alju01g0083 1009 SUPERFAMILY RNI-like 252 607 - -
Alju01g0083 1009 ProSiteProfiles Leucine-rich repeat profile. 289 311 IPR001611 GO:0005515
Alju01g0083 1009 SMART LRR_typ_2 431 455 IPR003591 -
Alju01g0083 1009 SMART LRR_typ_2 215 238 IPR003591 -
Alju01g0083 1009 SMART LRR_typ_2 335 359 IPR003591 -
Alju01g0083 1009 SMART LRR_typ_2 287 311 IPR003591 -
Alju01g0083 1009 SMART LRR_typ_2 551 575 IPR003591 -
Alju01g0083 1009 Pfam Leucine Rich repeat 288 302 IPR001611 GO:0005515
Alju01g0083 1009 Gene3D Transferase(Phosphotransferase) domain 1 788 998 - -
Alju01g0083 1009 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Alju01g0083 1009 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 179 279 - -
Alju01g0083 1009 Pfam Leucine rich repeat N-terminal domain 27 69 IPR013210 -
Alju01g0083 1009 Gene3D Phosphorylase Kinase; domain 1 705 787 - -
Alju01g0083 1009 Gene3D Ribonuclease Inhibitor 183 251 IPR032675 -
Alju01g0083 1009 FunFam Leucine-rich repeat receptor protein kinase EMS1 280 363 - -
Alju01g0083 1009 MobiDBLite consensus disorder prediction 987 1009 - -
Alju01g0083 1009 ProSitePatterns Protein kinases ATP-binding region signature. 711 735 IPR017441 GO:0005524
Alju01g0083 1009 SUPERFAMILY L domain-like 55 349 - -
Alju01g0083 1009 Gene3D Ribonuclease Inhibitor 311 624 IPR032675 -
Alju01g0083 1009 SMART serkin_6 705 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0083 1009 FunFam MDIS1-interacting receptor like kinase 1 788 997 - -
Alju01g0083 1009 SUPERFAMILY Protein kinase-like (PK-like) 700 979 IPR011009 -
Alju01g0083 1009 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 25 178 - -
Alju01g0083 1009 Gene3D Ribonuclease Inhibitor 252 310 IPR032675 -
Alju01g0083 1009 ProSiteProfiles Protein kinase domain profile. 705 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0083 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Alju01g0083 1009 FunFam MDIS1-interacting receptor like kinase 1 705 787 - -
Alju01g0083 1009 Pfam Protein kinase domain 709 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0083 1009 Pfam Leucine rich repeat 409 468 IPR001611 GO:0005515
Alju01g0083 1009 Pfam Leucine rich repeat 530 588 IPR001611 GO:0005515
Alju01g0083 1009 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 235 980 - -
Alju01g0083 1009 MobiDBLite consensus disorder prediction 983 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0083 Alju-ChrAlju01 720172 723432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0083 4 989 Receptor kinase-like Gene Family AT1G08590 63.022 0.0 1244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju01g0083 Pkinase 7.5e-46 CL0016