Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0078 ATGTGGGATTGTGCATGTGAGGCCCGTACGTTCGCTGTGGATAGAGCCTGGCTTTCCCCATGCTGTTCCGGTCCAATTCGTGTGAATAAGACCGGTACAAAATATGCCAACAAGAGCGAAGCTTGGCTTCTGAAGTTGTTTCTAGGTAAATCCGATTCCATCCATTCAAACTCCTGCTTCGCTGCAGCATCATTCTCATTCCCTACAGCCTCCACTTCCCTTTTCGCATCTGCTTTTGCTCAGATTCCCAGCTTATCCCACGTAATACCTGCTCGTTCTGTTCCCTCTCAGCTCCTGGTCAGACAAAGCTGGTCACTTGGGAGACTTCAGGTGCAGGCTGCTTCATCAAATTCCAACCTCAGAAGTGGTGAGCACATGTTTTCATCACATTCTAAATGCCTGAATGGCATATCTTTATCCCCAATTTCACAACATGATAAGCACTATCAAGATTATCCCTTCATTTCTAAGACATTGAGAAGAGATGATGTGATGCCCCGGCTAGGAGCTTCCCTTACTCACAGTGGGGAAGATGCATCTTTCCCACCTTCACATTCTTCTCGTCCGGAAATACATTCGGCAGCATTCATTTCTCAACCCCCGGAAAGTGATGATATTTCCTGGGGACCAGATCCCTTTCATGATATTCTTAATCTCTCTGTAAATGATTCTGTCCAGAATGATCAGATGGAAAGTAGTTCTTGTTATATGTCCGATGACAACACCAAAAAATCTGATTTTGCGGAGTGGGTAGATCAGTTAATATCAGTTGATGAATCTCCTCATCCAAACTGGAACCAGCTTCTAGTTGACGATAATGTACCAGATTCAAAATCAAAGGAGACCTACACCGCCAAGCAGCAGCATGCACCATCTGGAGAAGTTAATGTTTCTCCTACTTCAGCGTCAAATGCACAACAAAGTAAGCCTAGAATGCGTTGGACTCCAGAACTTCATGAAGCTTTCGTGGAAGCGGTGAATAAGCTTGGTGGCAGCGAGAAGGCTACTCCCAAGGGTGTTTTGAACCTAATGAAAGTTGAGGGTCTTACTATCTATCATGTGAAAAGTCATCTACAGAAGTATAGAACAGCCAGATTCAAACCCGAATCATCAGGAGGAGATTCTGAGAACAAGTTGACATCAACCAAAGAAATGAAATCTTCAGATTTGACAGCCGTGGGGATTACTGAAGCATTGCGGTTGCAGATGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGATTCAAAGAAAGTTGCAGACTCAAATAGAAAACCAAGGGAAACGTCTTCAGATGATGTTTGAGAAACAAAGAGAGATGGAGGACAGCAAACACAAAACATCATCCCCCTCCTCGGACAAGCCCATGGTATTAACTTCCCCCAAAAATGAGGATCAAGAAGCAACAACCATGGGCGAGGAATGTTCTGAGGATGCCTGCACAAAGCAAGAGGTGGAAGAAACTGAAGTTACTAATGAAGAAGAGGTGGGCTATCATCAGTTGGGTGCACCAGCCTCCAAACGGGTGAAAAGTGTATGA 1539 0.447 MWDCACEARTFAVDRAWLSPCCSGPIRVNKTGTKYANKSEAWLLKLFLGKSDSIHSNSCFAAASFSFPTASTSLFASAFAQIPSLSHVIPARSVPSQLLVRQSWSLGRLQVQAASSNSNLRSGEHMFSSHSKCLNGISLSPISQHDKHYQDYPFISKTLRRDDVMPRLGASLTHSGEDASFPPSHSSRPEIHSAAFISQPPESDDISWGPDPFHDILNLSVNDSVQNDQMESSSCYMSDDNTKKSDFAEWVDQLISVDESPHPNWNQLLVDDNVPDSKSKETYTAKQQHAPSGEVNVSPTSASNAQQSKPRMRWTPELHEAFVEAVNKLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQKYRTARFKPESSGGDSENKLTSTKEMKSSDLTAVGITEALRLQMELQKRLHEQLEIQRKLQTQIENQGKRLQMMFEKQREMEDSKHKTSSPSSDKPMVLTSPKNEDQEATTMGEECSEDACTKQEVEETEVTNEEEVGYHQLGAPASKRVKSV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0078 512 MobiDBLite consensus disorder prediction 170 189 - -
Alju01g0078 512 MobiDBLite consensus disorder prediction 261 311 - -
Alju01g0078 512 MobiDBLite consensus disorder prediction 436 512 - -
Alju01g0078 512 Gene3D - 308 367 - -
Alju01g0078 512 Pfam Myb-like DNA-binding domain 311 362 IPR001005 -
Alju01g0078 512 MobiDBLite consensus disorder prediction 364 385 - -
Alju01g0078 512 FunFam Myb family transcription factor 308 366 - -
Alju01g0078 512 NCBIfam myb-like DNA-binding domain, SHAQKYF class 309 363 IPR006447 GO:0003677
Alju01g0078 512 Pfam MYB-CC type transfactor, LHEQLE motif 395 439 IPR025756 -
Alju01g0078 512 SUPERFAMILY Homeodomain-like 307 363 IPR009057 -
Alju01g0078 512 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 306 366 IPR017930 -
Alju01g0078 512 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 298 483 IPR044848 GO:0003700
Alju01g0078 512 MobiDBLite consensus disorder prediction 450 466 - -
Alju01g0078 512 Coils Coil 396 416 - -
Alju01g0078 512 MobiDBLite consensus disorder prediction 284 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0078 Alju-ChrAlju01 662046 667659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0078 122 452 G2-like Transcription Factor Family AT3G04450 45.115 1.37e-73 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju01g0078 Myb_DNA-binding 9.5e-09 CL0123