Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0068 ATGGGGACAGAACTCATGAGAACATGTGTTCAAGAAGATAACGATGAGTTTCCATCAGTTCCACCTGGCTTTGAGTCATATACATCTTCCTCACTGAATACAGGGGAAGGCAGTGAGAAACAGAATGATAAAACCATGATTAATTTTTCAGTCTCTACAAGTGTTTCTAATTGTAAATCACAGTCAATTCAGGCTAAAACTGATGGTCAAGCTAGTGATACTGCACAGGTTGATGGGTCCCTTCGACGAAGACGATGGATCAACCATGGACGGTATGATAACAGTTCAGAGGAAGACTCTGATACTGAGCGGCTTGATCAAAATTTTCCCTCAGTACCTGGTCTTCCAAAGGGAGTTATCCGTGGATGTCTGGATTGCAGTAATTGCCAAAAGGTTATAGCCAGATGGAGGCCAGAAGATGCTTGCAGGCCCGCCCTTGAAGATGCTCCCGTTTTTTACCCAACTGAAGAGGAGTTTCAAGACACCATGAAATATATAGCAAGTATTTGTTCCAGAGCAGAACCATATGGCATTTGTCGCATTGTTCCCCCTTCGTCATGGAAGCCCCCTTGTCCTCTTAAGGGAAAGGTTATATGGGAGGGTTCTAAATTTGCTACTCGAGTTCAGAGGATTGATAAGCTTCAGAATCGTGATTCAATGAGAAAGATATCAAGGATTCATCTTAATACGAGACGGAAAAGAAAAAGATGCCATAGAATGGGATTGGATAATGGCAGTCATAGAGGACCTAATGCAGGATTTTGTGAGATTGAAAGGCCCTTTGGGTTTGAACCTGGCCCAGAATTTACTTTGGAAACATTTCAGAGATATGCAGATGAATTTAAGGCCAGTTACTTCAGAAAGAATGATAATATATCTAATATGGGAGGTAATACAACAATGTCAAAAGGATGGGAGCCTTCTGCGGAGAACATAGAGGGTGAATATTGGCGAATGGTGGAGAGACCTACTGAAGAAATTGAGGTGCTTTATGGAGCTGACCTGGAAACTGGGGTTTTTGGGAGTGGTTTTCCCAGAAAGCTTAGTGAAGTTGGTTCTGATTTACACAAAGAGTACATAAAGTCTGGCTGGAATTTAAATAACTTTGCTAGGCTTCCTGGATCTCTGCTTTCATATGAAAGCAGCGATATATCTGGTGTCCTTGTACCCTGGCTGTATATAGGAATGTGCTTTTCTTCCTTTTGTTGGCATGTGGAGGATCACCATTTATATTCATTGAATTACATGCATTGGGGTGCTCCAAAAATGTGGTATGGTGTCCCTGGCAAAGATGCTTGCAAACTGGAAGAGGCCATGAGAAAGCATTTGCCAGACCTTTTTAGAGAACAACCTGATTTGCTTCATAAGCTGGTCACTCAGCTTTCTCCTTCTATCCTTAAGTCTGAAGGAGTACCTGTCTATAGGTGTGTCCAGAACCCTGGAGAGTTTGTTCTGACATTCCCTCGAGCTTATCATTCTGGATTCAATTGTGGCTTCAACTGTGCAGAGGCTGTTAACGTAGCTCCAGTTGATTGGCTGCCCCATGGGCAGATTGCCATTGAGCTATACCGGGGTCAAGGACGCAAGACTTCTATATCTCATGATAAACTGTTGCTTGGGGCTGCTAGGGAAGCAGTGCGAGCACTGTGGGAGCTTAACCTGCAGAAGAAGAATACTTCAATTAATCTAAGATGGAAAGATGTCTGTGGAAAAGATGGCGTTCTAGCAAAAGCACTCAAGACACGTGTTGAGATGGAACAAGTAAGGAGGAAATTTCTCTGCAGTTCTTCACAGGCATCGAAGATGGAGAGCAATTTTGATGCCACAAGTGAAAGGGAATGCAGTGTTTGCTATTTTGATTTACACTTATCTGCAGCTGGTTGCCATTGTTGCCCAGACCGATATGCTTGCTTGGATCATGCAAAGCAGTTCTGTTCATGTGCTTTGGATTCCAAATTCTTCCTCTTCCGTTATGATATTAGTGAATTATTTATCCTCGTCGAGGCATTGGAAGGAAAATTAAGTTCAGTATATAGATGGGCAAAATTAGATCTTGGGTTGGCACTAACTTCTTCTATATCAAAAGACAAAAGCCGATGTAGCAACTTAATTCAATCTTCAAAGGAAGCAATGCTTCACAAATTGAGATTAGATTCCTCAGATCTGTCTGGTTCTTCTTGTGGCACTACGGTTAAAGAGACGACATTGCATCCATCAGTTGTTTCTATTGAAGATTCGCATTTGATAGATGTCCCAATAGAGAATCTGAGTTTTATAGAACTAAGAAAATCAGCAGAAGATGTGATTCCCTTGGGTTATTCAAAAGAACCGTCCACATCTAATTCCTGGACAACTCCATGTGAGATGATTAGTCATGAGAGAGATTCTGAGAAAGAGTCCATTATTTGCAAATCTGCTGTCGAGAATCCTGTTTGTCAGTTGCCTGTAGGGGGCACCTCCTCTCCTTTACCTCTTCCTTTAGCTGAACATGGACCTAAGAAAACTCCTTATGGGCATGATAATGTTATACTTCTTAGTGATGATGAAACTGATGAACCTAAGATAACAGAAAAAGATAGCAAGAAGGAGCTTTCTCAAAGGCTTATAGGTTACTGTGATAAACTAAACCCATGTTATTATAGAGAAGATCCAGACGGGACTGTCCCTGTCTCAGATGCTGCTTTAAAGGTTGGGAATGATGTGCCTCATGAAAATACGAGTTCTCATTCAATTTATCATTTGCATGTGAAACAGGAACATGATATAATTAAGGGAGCAGTTTTAGATCCAGTAGATTTATCCTGCAATATTGGTTATGGTAGTGCAGAGTCAGCCAGGCAAATTCAGGCTTCCTCAACAAGAGAGAGTAGAGATCATTGTCTAGATTCTTCAGAGAGTTGTCCTCTGAATCCACGGCATTCTGGGACTGTCAAACCTAAGAATGAGGACAACCATGAGAAGGTTGGAGTATGTAGTGCAGATAATGCTAGAGCTGTTAATGGAAACCTGTCCTGTAGTCCAAACAATTTGGGAAGATACTATCGTCAGAAAGGTCCTCGTATAGCAAAGGTTGTCCGGCGCATCAACTGCAATGTTGAGCCTCTAGAATTTGGAATCATGTTTGCTGGAAAGTCATGGTGCAACAGTCGGACTATATTTCCAAAGGGATTTCGAAGCCGTGTGAGATACATAAATGTCTTAGATCCAACAAGTATGTGTTATTATATTTCAGAAATTCTTGATGCTGGACGAGATGGGCCTCTGTTTATGGTGTCCTTGGAACATCACCCAAGTGAGGTGTTCATTCATCTTTCTGCCGGTAGATGCTGGGAACTGGTACGAGAGAGAGTGAATCTGGAAATCACTAAGCAACATAAGCTGGGAAGAAAGGACCTTCCTCCTTTGCAGCCACCTGGCAGCATTGATGGCTTTGAAATGTTTGGGTTTTCTTCGCCAGCTATAGTGCAGGCTATCGAGGCATTGGATCAAAATCGTGTCAGTAAGGAATATTGGGATTCGCGGCCCTATTCACGGGCTCTAGGTCAAATTCAGCAAACTTCACGGCCCAAAGAAAATGGTGGAAGTGCGGATGGGCCATTCCAGGGGGGAAACGTTCAGGGGGTCCACAGGAATGAGGTCGTGCCTGTTGGAATAGATGCAGTGTTAAGGAGTCTGTTCAAAAAAGCTAATGAACAAGAATTGAACTCGTTGTGCAGCATTCTTTGTGACGACAATAACAATACTGCAGCTGACGGCAGCCTTCTTGTTCAACTTCTCAACCAAGAGATCAGCAGTCGTCCCAGATGA 3807 0.4255 MGTELMRTCVQEDNDEFPSVPPGFESYTSSSLNTGEGSEKQNDKTMINFSVSTSVSNCKSQSIQAKTDGQASDTAQVDGSLRRRRWINHGRYDNSSEEDSDTERLDQNFPSVPGLPKGVIRGCLDCSNCQKVIARWRPEDACRPALEDAPVFYPTEEEFQDTMKYIASICSRAEPYGICRIVPPSSWKPPCPLKGKVIWEGSKFATRVQRIDKLQNRDSMRKISRIHLNTRRKRKRCHRMGLDNGSHRGPNAGFCEIERPFGFEPGPEFTLETFQRYADEFKASYFRKNDNISNMGGNTTMSKGWEPSAENIEGEYWRMVERPTEEIEVLYGADLETGVFGSGFPRKLSEVGSDLHKEYIKSGWNLNNFARLPGSLLSYESSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDACKLEEAMRKHLPDLFREQPDLLHKLVTQLSPSILKSEGVPVYRCVQNPGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYRGQGRKTSISHDKLLLGAAREAVRALWELNLQKKNTSINLRWKDVCGKDGVLAKALKTRVEMEQVRRKFLCSSSQASKMESNFDATSERECSVCYFDLHLSAAGCHCCPDRYACLDHAKQFCSCALDSKFFLFRYDISELFILVEALEGKLSSVYRWAKLDLGLALTSSISKDKSRCSNLIQSSKEAMLHKLRLDSSDLSGSSCGTTVKETTLHPSVVSIEDSHLIDVPIENLSFIELRKSAEDVIPLGYSKEPSTSNSWTTPCEMISHERDSEKESIICKSAVENPVCQLPVGGTSSPLPLPLAEHGPKKTPYGHDNVILLSDDETDEPKITEKDSKKELSQRLIGYCDKLNPCYYREDPDGTVPVSDAALKVGNDVPHENTSSHSIYHLHVKQEHDIIKGAVLDPVDLSCNIGYGSAESARQIQASSTRESRDHCLDSSESCPLNPRHSGTVKPKNEDNHEKVGVCSADNARAVNGNLSCSPNNLGRYYRQKGPRIAKVVRRINCNVEPLEFGIMFAGKSWCNSRTIFPKGFRSRVRYINVLDPTSMCYYISEILDAGRDGPLFMVSLEHHPSEVFIHLSAGRCWELVRERVNLEITKQHKLGRKDLPPLQPPGSIDGFEMFGFSSPAIVQAIEALDQNRVSKEYWDSRPYSRALGQIQQTSRPKENGGSADGPFQGGNVQGVHRNEVVPVGIDAVLRSLFKKANEQELNSLCSILCDDNNNTAADGSLLVQLLNQEISSRPR 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0068 1268 ProSiteProfiles FYR domain FYRC motif profile. 1084 1174 IPR003889 GO:0005634
Alju01g0068 1268 SMART JmjN_1 148 189 IPR003349 -
Alju01g0068 1268 ProSiteProfiles JmjN domain profile. 149 190 IPR003349 -
Alju01g0068 1268 SMART fyrn_3 1038 1082 IPR003888 GO:0005634
Alju01g0068 1268 Pfam C5HC2 zinc finger 614 663 IPR004198 -
Alju01g0068 1268 MobiDBLite consensus disorder prediction 12 42 - -
Alju01g0068 1268 FunFam Putative lysine-specific demethylase JMJ16 1030 1168 - -
Alju01g0068 1268 ProSiteProfiles FYR domain FYRN motif profile. 1024 1082 IPR003888 GO:0005634
Alju01g0068 1268 MobiDBLite consensus disorder prediction 1181 1202 - -
Alju01g0068 1268 Pfam F/Y-rich N-terminus 1040 1079 IPR003888 GO:0005634
Alju01g0068 1268 SMART fyrc_3 1088 1182 IPR003889 GO:0005634
Alju01g0068 1268 MobiDBLite consensus disorder prediction 23 42 - -
Alju01g0068 1268 Gene3D - 1034 1166 - -
Alju01g0068 1268 Pfam jmjN domain 150 183 IPR003349 -
Alju01g0068 1268 Pfam JmjC domain, hydroxylase 391 507 IPR003347 -
Alju01g0068 1268 PANTHER LYSINE-SPECIFIC DEMETHYLASE 141 941 - -
Alju01g0068 1268 SUPERFAMILY Clavaminate synthase-like 267 551 - -
Alju01g0068 1268 ProSiteProfiles JmjC domain profile. 361 524 IPR003347 -
Alju01g0068 1268 Gene3D Cupin 134 508 - -
Alju01g0068 1268 MobiDBLite consensus disorder prediction 946 984 - -
Alju01g0068 1268 SMART cupin_9 361 524 IPR003347 -
Alju01g0068 1268 Pfam F/Y rich C-terminus 1086 1170 IPR003889 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0068 Alju-ChrAlju01 601217 607956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0068 1 1266 JUMONJI Transcription Factor Family AT1G08620 53.894 0.0 1215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Alju01g0068 JmjC 1.3e-46 CL0029