Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0061 ATGGACCAATTAGTTCTCGATGACATAATTAATCGTCTCCTTGAAGTCCGCGGTCGTCCTGGCAAGCAGGTTCAGTTGTCCGAGTCCGAGATCCGTCAGCTTTGCCTTGTCTCCAAAGATATTTTCTTGCAACAGCCTAATTTATTGGAACTTGAAGCGCCCATTAAGATTTGTGGTGATGTACATGGTCAATATTCTGATCTTTTACGTCTCTTTGAGTATGGTGGATTACCTCCGCATGCCAACTATTTATTTTTAGGGGATTATGTGGACCGAGGGAAGCAGAGTTTGGAAACAATATGCCTTCTTCTTGCTTATAAAATAAAATATCCTGAGAACTTTTTCTTGTTGAGGGGGAACCATGAATGTGCTTCTATAAACCGTATATATGGATTTTATGATGAGTGTAAGAGGAGGTTTAATATAAGGTTATGGAAGACATTTACTGAGTGCTTCAACTGCCTACCTGTTGCGGCCCTTATTGATGAAAAGATTATTTGCATGCATGGGGGACTTTCTCCTGACTTGCATAATTTGGATCAGATAAGAAATCTACAGCGTCCAACGGATGTGCCAGATACTGGTTTGCTTTGTGATCTTCTTTGGTCAGACCCAAGCAAAGATGTTCAAGGTTGGGGAATGAATGACAGAGGGGTTTCGTATACATTTGGTGCTGATAAGGTCTCAGAATTTCTTCAGAAACAAGATCTGGATCTTATTTGCCGTGCTCATCAGGTTGTGCAGGATGGTTACGAGTTCTTTGCTGACCGACAGCTAGTAACAATATTTTCAGCACCTAATTATTGTGGAGAGTTTGACAATGCTGGTGCTATGATGAGTGTTGATGAGACACTGATGTGCTCTTTCCAAATATTAAAGCCAGCGGATAAAAAGCCAAAGATCAATTTTGGAAGTAGTACAACAACTACTAAGCCCGGAAATTCTCCAGCAGGTATAAAGTCCTTCCTGGGTACAAAGGTTTGA 984 0.4106 MDQLVLDDIINRLLEVRGRPGKQVQLSESEIRQLCLVSKDIFLQQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPHANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIRLWKTFTECFNCLPVAALIDEKIICMHGGLSPDLHNLDQIRNLQRPTDVPDTGLLCDLLWSDPSKDVQGWGMNDRGVSYTFGADKVSEFLQKQDLDLICRAHQVVQDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKINFGSSTTTTKPGNSPAGIKSFLGTKV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0061 327 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Alju01g0061 327 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Alju01g0061 327 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Alju01g0061 327 SMART pp2a_7 26 296 IPR006186 GO:0016787
Alju01g0061 327 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 299 - -
Alju01g0061 327 Gene3D - 1 305 IPR029052 -
Alju01g0061 327 CDD MPP_PP1_PPKL 5 294 - -
Alju01g0061 327 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Alju01g0061 327 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Alju01g0061 327 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Alju01g0061 327 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Alju01g0061 327 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Alju01g0061 327 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Alju01g0061 327 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Alju01g0061 327 FunFam Serine/threonine-protein phosphatase 52 305 - -
Alju01g0061 327 SUPERFAMILY Metallo-dependent phosphatases 17 298 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0061 Alju-ChrAlju01 530319 533790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0061 33 239 Calmodulin-binding Proteins AT5G63870 31.048 1.63e-27 107