Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0058 ATGGAACCCAATGACAACCAGCTCAGCTCCTACTTCCACCACCAGCAACAGCAGACCGCCACCTCCGCCGCCGCCGCCCCCACCACCTCCTCCCCCACCAATGGCCTCTTACCCACCACTGACGCCTCCCACATGGTCTTCCCTCATTCCGTGCCCTCTGCCGTCTCCTCTCAATTAGAACCCGCAAAGAGGAAGAGGGGCAGGCCCAGGAAGTATGGCACCCCCGAGCAAGCTCTCGCCGCAAAGAAAGCTGCTACCTCCTCCTCTCACTCTTTCAACAAGGATAAAAAGGGCCACGCTTTGGGCAGTCCCTCTGCTTCCTCTTCGTACACTGGCTCCTCCAAGAAATCCCAGTTGTCTTCTCTAGGTCAAGGCTTCACCCCACATGTCATTACTGTTGCTGCTGGTGAGGATGTTGGCCAAAAAATTATGTTGTTCATGCAACAAAGTAGGCGGGAAATGTGCATCTTGTCTGCATCTGGTTCCATCTCAAATGCTTCTCTTCGTCAGCCTGCAACCTCTGGAGGCAATATCGCATATGAGGGTCGATTTGAGATTATTTCACTTTCTGGCTCCTATGTCCGTACTGAACTTGGAGGGCGCACTGGTGGTCTTAGTGTATGCTTATCGAGTACTGATGGTCAAATCATAGGTGGAGGAGTTGGTGGACCCCTAAAAGCTGCTGGTCCAGTTCAGGTCATTGTTGGTACATTTTTTCTGGATGCCAAGAAGGATGTGGGAGCTAGTGCTGGTGTAAAAGGCGACGCTCCTGGGAGCAAGCTGGCATCATTGGTTGGGGAATCAGTATCAAGTTTAGGTTACCAGCCGGGGGTTGAATCTTCCAGTGGCAATCCAATTCACGGAAATGATGATCATCATCATGCTGTTGGAGGGAGTCATTTCATGATTCAACAACGCGCTGTGCATGTGACACCTTCCCAGCCCACAGAATGGTGGGCTCGTCCTGATTCCAGAAATGCTGGGTTTGAACAAATGACAGGAAAAACAGGCCATGGGGCTCACCAGTCTCCAGAGAATGGGGATTTTTTAACATGA 1056 0.5161 MEPNDNQLSSYFHHQQQQTATSAAAAPTTSSPTNGLLPTTDASHMVFPHSVPSAVSSQLEPAKRKRGRPRKYGTPEQALAAKKAATSSSHSFNKDKKGHALGSPSASSSYTGSSKKSQLSSLGQGFTPHVITVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGNIAYEGRFEIISLSGSYVRTELGGRTGGLSVCLSSTDGQIIGGGVGGPLKAAGPVQVIVGTFFLDAKKDVGASAGVKGDAPGSKLASLVGESVSSLGYQPGVESSSGNPIHGNDDHHHAVGGSHFMIQQRAVHVTPSQPTEWWARPDSRNAGFEQMTGKTGHGAHQSPENGDFLT 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0058 351 MobiDBLite consensus disorder prediction 273 296 - -
Alju01g0058 351 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 16 260 IPR039605 GO:0003680
Alju01g0058 351 Pfam Plants and Prokaryotes Conserved (PCC) domain 128 238 IPR005175 -
Alju01g0058 351 ProSiteProfiles PPC domain profile profile. 123 267 IPR005175 -
Alju01g0058 351 CDD DUF296 127 238 IPR005175 -
Alju01g0058 351 MobiDBLite consensus disorder prediction 1 121 - -
Alju01g0058 351 Gene3D - 128 253 - -
Alju01g0058 351 MobiDBLite consensus disorder prediction 327 351 - -
Alju01g0058 351 MobiDBLite consensus disorder prediction 102 121 - -
Alju01g0058 351 MobiDBLite consensus disorder prediction 1 40 - -
Alju01g0058 351 SUPERFAMILY AF0104/ALDC/Ptd012-like 125 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0058 Alju-ChrAlju01 509144 516644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0058 19 349 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 51.667 4.99e-95 287