Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0056 ATGAATCTGTCAATGCTCTTGAGTGAATTCCTTTTGGATTCTGGACATATTCATAAATTTGCATTCGCACCACCTTGTACAAAACAGTCACGACTTCCCCAGCCCATTGTGATAATCGAAATGTCAAACCCAAAGGTGTTCTTTGACATATTAATTGGAAAGATGAAAGCTGGTCGAATGGTGATGGAGTTATTTGCAGATGTCACCCCAAAGACAGCTGAAAACTTCCGAGCTCTCTGCACTGGTGAAAAGGGGATCGGCGCATCTGGGAAGCCTTTACATTACAAGGGGTCCGCATTTCACCGAATTATTCCACAGTTCATGTGTCAGGGAGGCGATTTCACCAGAGGGAATGGAACTGGTGGGGAATCAATTTACGGCTCAAAGTTTGCTGACGAGAATTTCAAGCTGAAGCATACGGGGCCTGGTGTTCTCTCAATGGCAAATGCTGGTCCCAATACAAATGGTTCTCAGTTCTTTATATGCACTATGAAGACTGAATGGCTTGACGGAAAGCATGTTGTATTTGGGAAAGTTGTTGATGGCTACGGTGTCGTTAAGGAAATGGAGAAAGTGGGTTCACAGAGTGGGAGGACCTCAGAACCAGTTGTAATTGAAGATTGTGGTCAGCTAGCGGACAACTGA 645 0.4465 MNLSMLLSEFLLDSGHIHKFAFAPPCTKQSRLPQPIVIIEMSNPKVFFDILIGKMKAGRMVMELFADVTPKTAENFRALCTGEKGIGASGKPLHYKGSAFHRIIPQFMCQGGDFTRGNGTGGESIYGSKFADENFKLKHTGPGVLSMANAGPNTNGSQFFICTMKTEWLDGKHVVFGKVVDGYGVVKEMEKVGSQSGRTSEPVVIEDCGQLADN 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0056 214 Gene3D - 37 214 IPR029000 -
Alju01g0056 214 PIRSF Peptidylpro_ismrse 32 214 IPR024936 GO:0003755
Alju01g0056 214 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 158 170 IPR002130 GO:0000413|GO:0003755
Alju01g0056 214 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 IPR002130 GO:0000413|GO:0003755
Alju01g0056 214 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 171 186 IPR002130 GO:0000413|GO:0003755
Alju01g0056 214 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 112 IPR002130 GO:0000413|GO:0003755
Alju01g0056 214 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 79 IPR002130 GO:0000413|GO:0003755
Alju01g0056 214 CDD cyclophilin_ABH_like 44 209 - -
Alju01g0056 214 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 54 209 IPR002130 GO:0000413|GO:0003755
Alju01g0056 214 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 95 112 IPR020892 GO:0003755|GO:0006457
Alju01g0056 214 SUPERFAMILY Cyclophilin-like 37 211 IPR029000 -
Alju01g0056 214 FunFam Peptidyl-prolyl cis-trans isomerase 40 212 - -
Alju01g0056 214 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 45 211 - -
Alju01g0056 214 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 47 210 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0056 Alju-ChrAlju01 501267 502362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0056 58 205 U-box Gene Family AT5G67530 48.667 2.54e-32 120