Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0041 ATGGCAAAGACAGGCTTCTCTGAAAATGACTCAACTTTGTTTCCCCATGCAAAGGCTTTGGATTTGAAGCACAAATTGCGGGGGCTCGAATTCCATGATTTGTCTATTCCTCCGGAATTTCGATGCCCCATATCTCTAGAGCTAATGAGTGATCCTGTTATCCTGGCCACCAGACTGAACGGAGTTGAGTTGCCTAAGCCTCTTCGGGACATTGATGAAGAAGTAATAACTGGTGCAGACAGAAGCCATTTAAATTCATTACTCAAGAAGTTGTCAATGTCTATTTCTGATCAGAAAGCAGCTGCAAAAGAGCTCCGGCTATTAACAAATCCATTGTCACCTGGTGCGGCTTATATCCCTCCTGACCTTCACGAGGACTTGATCACTACTATTCTAAATTTATCAATTCATGATGATAATAAGAAAATGTTTGCTGAGAATCCTATGGTCATCCCTCTGCTGATTGAGTCCTTAAAATTTGGAACCATCCAAACAAGAAGTAATGCTGCGGCAGCTATTTTCACATTATCAGCACTTGATTCCAACAAGAGCACCATTGGAAATTTTGAGGCCATCAAACATTTAATTGAGCTTTTGGAGGAGGGACATCCATTGGCCATGAAAGATTCTGCCTCAGCGATATTCAACCTATGTTTAGTGCATGAAAATAAAGGAAGGACTGTTCGAGAAGGAGCTGTCCCAGTTATCTTGAATAAGATCATGGACTGTGTTCTAGTTGATGAGTTGTTGGCTATTATGGCACTTCTATCTAGCCATCCAAAGGCGGTTGAAGAAATAAGTGACCTTGGTGTAGTCTCCTTGTTACTCAGTATAATACAGGAGAGCACATCTGAAAGCTGCAAGGAAAATTGTGTTGCAATCCTATACACAATCTGTCTTACTGATAGAACAAAATGGAAGGAAATTAGACAAGAAGAAAAAGCCAAGGGCATACTTTACGAACTCACATAA 972 0.4084 MAKTGFSENDSTLFPHAKALDLKHKLRGLEFHDLSIPPEFRCPISLELMSDPVILATRLNGVELPKPLRDIDEEVITGADRSHLNSLLKKLSMSISDQKAAAKELRLLTNPLSPGAAYIPPDLHEDLITTILNLSIHDDNKKMFAENPMVIPLLIESLKFGTIQTRSNAAAAIFTLSALDSNKSTIGNFEAIKHLIELLEEGHPLAMKDSASAIFNLCLVHENKGRTVREGAVPVILNKIMDCVLVDELLAIMALLSSHPKAVEEISDLGVVSLLLSIIQESTSESCKENCVAILYTICLTDRTKWKEIRQEEKAKGILYELT 323
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0041 323 ProSiteProfiles U-box domain profile. 35 57 IPR003613 GO:0004842|GO:0016567
Alju01g0041 323 Pfam U-box domain 36 56 IPR003613 GO:0004842|GO:0016567
Alju01g0041 323 Gene3D - 105 245 IPR011989 -
Alju01g0041 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 30 99 IPR013083 -
Alju01g0041 323 Gene3D - 246 322 IPR011989 -
Alju01g0041 323 SUPERFAMILY RING/U-box 27 57 - -
Alju01g0041 323 PANTHER U BOX DOMAIN-CONTAINING 29 322 - -
Alju01g0041 323 SUPERFAMILY ARM repeat 98 320 IPR016024 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju01g0041 Alju-ChrAlju01 387709 389851 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0041 72 323 U-box Gene Family AT3G07360 55.235 6.09e-91 272